Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq32170 248 8e-61
seq40302 199 4e-46
seq76387 152 5e-32
seq2574 149 6e-31
seq28390 140 3e-28
seq13731 131 2e-25
seq280 118 1e-21
seq53698 114 1e-20
seq8352 111 2e-19
seq22380 109 5e-19
seq322 104 2e-17
seq886 84.2 2e-11
seq21746 82.4 7e-11
>seq32170
Length=3971
Score = 248 bits (274), Expect = 8e-61
Identities = 373/527 (71%), Gaps = 5/527 (1%)
Strand=Plus/Minus
Query 149009 CTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTC 149068
||| |||||||| || ||| |||||| |||| |||||| |||||| |||
Sbjct 3955 CTGGGCGCGCACCTGTCGCTTGTAGCGCTTCTCCGCCTCGTACTTCTCGTACAGCTCCTC 3896
Query 149069 GAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCA 149128
|| |||||||| |||| || | || |||||||||| |||||||||||| ||||||||
Sbjct 3895 AAAGGCCTCGCCCCAGCAGTCCTGCAGGCCGGGGCACTCGTGCGGGCACATCAGCGACCA 3836
Query 149129 CACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAG 149188
||||||||||| | |||||||||||||| || || |||||||| | ||||| | |||
Sbjct 3835 GACGCCGTCCGCCTGGACGCGCTTCATAAAGAGGTCCGGCACCCACATGGCGTAGAAGAG 3776
Query 149189 GTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATAT 149248
|||||| || | || || | ||| |||| |||||||| ||| | ||| ||
Sbjct 3775 GTCGCGGGCACGGAGCTCCTCCGAGCCGGTGTTCTTGCGCAGGTCGAGAAACTCGAAGAT 3716
Query 149249 GTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTG 149305
||| ||||||||||| || | ||| | || | ||| ||| ||||||| ||||||||
Sbjct 3715 GTCGGCGTGCCACGGTTCGAGGTAGATGGCAAACGCCCCCGGGCGCTTGTTCCCGCCCTG 3656
Query 149306 GTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGT 149365
||| |||| ||| | ||||||| | || || | ||| || | | ||| ||
Sbjct 3655 GTCCACGTAGCGGGCGGTGTTGTTGTAGACGCGCAGCATCGGCACCAGCCCATTGCTGAC 3596
Query 149366 GCCGTTAGTAGAGCTAATGCGACTG-CCGCGCGCTCGCACTTTGTGCACGTTGACGCCGA 149424
|||||| || ||| ||| || ||||| || || | ||||||||||||||| |
Sbjct 3595 GCCGTTTGTGCCGCTGATGTAGGTGCCCGCG-GCGCGGATGCAGTGCACGTTGACGCCAA 3537
Query 149425 TGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGA 149484
|||||||| | |||| |||||| ||||| | ||||| |||||||||||| |
Sbjct 3536 TGCCGCCGGCCGACTTGGAGATGATGGCGCACTGCTTCAGCGTGTCGTAGATGCCCTCAA 3477
Query 149485 TGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGA 149531
| ||| | |||||||||||||| ||| ||| ||||||
Sbjct 3476 TCGAGTCCTCGGAGAGCGTCAGCAGAAAGCAGGAGGACAGCTGCGGA 3430
Score = 113 bits (124), Expect = 4e-20
Identities = 140/189 (74%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 149588 CATCATCTCGTACGACTCGA-GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGA 149646
||||| | ||||| ||| | | |||| || ||||| ||| || ||||| | |||||
Sbjct 3296 CATCAGATTGTACGTCTCAATGGCCGCG-TCAATGTCCTCGTAGTGAATGCCCACGGCGA 3238
Query 149647 CGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGC 149706
||||||||||||| ||||| || |||||| |||| || || || || |||| |||||
Sbjct 3237 CGCGCATCAGCATCTGCTGGGGGCGCTCCACCACCTTCCCGCCGATCTTCAGCAGGTAGC 3178
Query 149707 CGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGG 149766
| | || |||||| |||||||||| ||||||| ||||||||| ||| | ||||
Sbjct 3177 TGCGGTAGAGCGTCTTGAAGCCAAAGTAGTTGTAGTGAAAGTCGCGATCGTAGATGATGG 3118
Query 149767 CGGCGTCGA 149775
| | || ||
Sbjct 3117 CCGAGTTGA 3109
>seq40302
Length=2817
Score = 199 bits (220), Expect = 4e-46
Identities = 510/761 (67%), Gaps = 24/761 (3%)
Strand=Plus/Plus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||||||||||||||| |||||||| || || || || ||||||| || | |
Sbjct 1943 CTGGTACTCGCCGACGCGCTTCTCAAAGAAATTGGTCTTTCCCTCCAGGCTGATCTGCTC 2002
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || || || || || | |||| |||| || ||| ||| | || || |||||
Sbjct 2003 CATGAAGTCAAAGGGATTCTTGACGTTGTAGTACTTGGGCACGCCGAGCTCCACCAGCAG 2062
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
||||| || ||||||||||| | |||| || ||||||||| | | ||
Sbjct 2063 CCGGTCGGCGCAGTACTCAATGTACGTGGACATCAGCTCGTTGTTCATGCCAATGAGGGC 2122
Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
||||| || | || | |||| ||||||| ||| ||| || ||||| |||| ||
Sbjct 2123 GACCGG-AAGGGCGTCAGTGAGGAACTCCTGCTCGATGCGGACGGCCTCGTTGATGATCT 2181
Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTG--TTCG--ATGCGCGTTCGGTAGTACAGGCAC 120645
| || ||| |||| | | ||| || | || || || ||
Sbjct 2182 GCACCAC-------CCGCTCATCGTACGGCTTCTTAATCAGGTGGCGAAAGAGGAGACAG 2234
Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705
|||||||| |||||||||||||||||| |||||||| ||||| || ||||||||
Sbjct 2235 GCAAAGTCGCAGTGCAGGCCCTCGTCGCGGCTGATCAGCTCATTGCTGAAGGTCAGGCCC 2294
Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765
||||| | ||| | |||| | | || ||| ||||||| ||| ||||| | |
Sbjct 2295 GGCATCAGGCCGCGCTTCTTCAGCCAAAAGATGCTGGCAAAGGAGCCGCTGAAGAAGATG 2354
Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGT--CGCCGTCTT--GCTGTC 120821
||||||||| ||| |||||||| | ||||||||| || || |||||| || || | |
Sbjct 2355 CCCTCCACGGCGGCGAAGGCGACGAGGCGCTCGGCAAAGGTGGCGCCGTTTTCGGCGGCC 2414
Query 120822 GATCCACTTCATGGCCCACTCGGCCTT-TTTGCGCACGCACGGCATCCGCTCGAACGCGT 120880
| |||| ||||||||||| ||||| || ||| ||||| |||||| || || ||||
Sbjct 2415 G-TCCAGGCCATGGCCCACTTCGCCTTCTTCGCG-ACGCAGGGCATCGTCTGGATGGCGT 2472
Query 120881 TCAGCAGCATGTCGCGCTCGCCCTCCTC-CGCAATCAGCTGATGGATGAGCAGATTGTAC 120939
| | || ||||||| | | || | | || || | ||| ||||| ||||
Sbjct 2473 TGAAGAGGTACTCGCGCTGGACGCGGTCGCTGATGTAGGTG-TTGATCAGCAGGGAGTAC 2531
Query 120940 ATTTCCGTGTGCACGCACTCGATCAGCACT-TGCTGGTTGTAAAAGTACTGCGCCTCCAG 120998
|| |||| ||| ||| |||||| ||| | || | ||| ||| | | |||||
Sbjct 2532 ATCTCCGAGTGGACGTTCTCGAT-GGCAATCTGGAAGCCGTAGAAGCAACGGGCCTCGGT 2590
Query 120999 CTCGGGCACCGCCCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGC 121058
||| |||| | || | | ||| ||||| ||| ||||| | |||| |||
Sbjct 2591 GACGGTCACCTCGCGGATGAAGCGCTCCGCGAGGTTCTCATTGACGATGCCGTCGCTGGC 2650
Query 121059 GGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGT 121099
||||||||| ||||| ||||| ||||||||| |||||||
Sbjct 2651 GGCGAAGAAGGCCAGAACGTGGGAGATAAAGTGGCGCTCGT 2691
>seq76387
Length=1185
Score = 152 bits (168), Expect = 5e-32
Identities = 157/203 (77%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || |||||||| | ||| ||| ||||||||||||||| |
Sbjct 791 GGTGGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGACC-GTCCTCGAGCTGCTTTC 849
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| ||||||||||| || |||||||| |||||||| |||||| ||
Sbjct 850 CAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCT 909
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | || ||| |||||||||| |||| ||||| ||| |||||||| || |
Sbjct 910 TCACATTCTCGATGGTATCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGG 969
Query 133642 TTTTTACGAAAATCTGCATGGCT 133664
| || || || ||||||||| ||
Sbjct 970 TCTTCACAAAGATCTGCATGCCT 992
Score = 145 bits (160), Expect = 7e-30
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| || || || ||||| || | ||| | ||||||||||||||||||
Sbjct 218 GGTGGACTCCTTTTGGATGTTGTAGTCCGAGAGGGTGCGCCCGTCCTCGAGCTGCTTGCC 277
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|||| | || || ||||||||||| || || ||||| |||||||| |||||| |||
Sbjct 278 CGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTT 337
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| |||||| |||||||||| |||| |||| || |||||||| || ||
Sbjct 338 CACATTCTCAATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGT 397
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 398 CTTAACGAAGATCTGCAT 415
Score = 136 bits (150), Expect = 4e-27
Identities = 149/194 (77%), Gaps = 3/194 (2%)
Strand=Plus/Plus
Query 133468 ACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCG 133526
|| |||| || || ||||| |||| | ||| ||| ||||||||| |||||||| |||
Sbjct 569 ACCCTTT-TGGATGTTGTAGTCGCTGAGGGTGCGACC-GTCCTCGAGTTGCTTGCCAGCG 626
Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586
| ||||| ||||||||||| || || ||||| |||||||| |||||| ||| |
Sbjct 627 AAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACA 686
Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646
| ||||| |||||| |||||||||| |||| |||| || |||||||| || || ||
Sbjct 687 TTCTCAATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTA 746
Query 133647 ACGAAAATCTGCAT 133660
||||| ||||||||
Sbjct 747 ACGAAGATCTGCAT 760
Score = 89.7 bits (98), Expect = 5e-13
Identities = 81/98 (83%), Gaps = 3/98 (3%)
Strand=Plus/Plus
Query 133468 ACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCG 133526
|| |||| || || ||||| |||| || ||| ||| |||||||||||||||||| |||
Sbjct 1090 ACCCTTT-TGGATGTTGTAGTCGCTCAGAGTGCGACC-GTCCTCGAGCTGCTTGCCAGCG 1147
Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
| ||||| ||||||||||| ||||||||||| |||||
Sbjct 1148 AAGATGAGTCGCTGCTGGTCCGGAGGGATGCCCTCCTT 1185
>seq2574
Length=80092
Score = 149 bits (164), Expect = 6e-31
Identities = 148/190 (78%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 133473 TTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530
||||| || ||||| |||| || ||| || || ||||||||||||||||| ||| | |
Sbjct 58862 TTCTGGATGTTGTAGTCGCTCAGCGTTCGGCCG--TCCTCGAGCTGCTTGCCGGCGAAGA 58919
Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590
| || ||||||||||| || |||||||| |||||||| |||||| ||| | | ||
Sbjct 58920 TCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCT 58979
Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650
| | |||||| |||||||||| |||| ||||| ||| ||||| || || || || ||||
Sbjct 58980 CGATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 59039
Query 133651 AAATCTGCAT 133660
| ||||||||
Sbjct 59040 AGATCTGCAT 59049
>seq28390
Length=4902
Score = 140 bits (154), Expect = 3e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
|| || | ||| ||||| ||||| |||||||| || | ||| ||||||||||
Sbjct 513 AAGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGC 454
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| || || ||| | ||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct 453 TGTTTACCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATC 394
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
||| ||| | | ||| | ||| || | |||||| || |||| ||||| ||| |||||
Sbjct 393 TTTGCCTTCACATTCTCGATCGTATCAGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCC 334
Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661
|| || || || || || || ||||||
Sbjct 333 GTGAGGGTCTTCACAAAGATTTGCATG 307
>seq13731
Length=15303
Score = 131 bits (144), Expect = 2e-25
Identities = 610/955 (64%), Gaps = 25/955 (3%)
Strand=Plus/Plus
Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGC 148106
|||||||| ||||| ||||| ||||| || || || || || ||||||| ||| | |
Sbjct 695 TTAAACGATTGGCTTTGGTCGATGAATGCTCCCCGATCTGCTGCCATTTTAATT-GAAGT 753
Query 148107 TTTATCTTC-ATCTCCCAGGCCGTCTTGTACAGC-CGCTTGATATGATCGGGAATGCCGT 148164
|||| | || ||||| | || |||||||| ||| || || | || ||| |
Sbjct 754 TTTAACCGAGATTTCCCATACAGTTTTGTACAGATCGCGA-ATGTGCTGCGGTATGGATT 812
Query 148165 CGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATA 148224
| |||| || | ||||| ||| | || ||| | ||| ||| || || | |
Sbjct 813 CTATGCCTTGTATGGAGCCACGGCTAGTAATAATTTTATTTTTCATGTCATCATCCCACA 872
Query 148225 GGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGA 148284
| ||| | || || | || || ||||| || || ||||| ||||| | ||
Sbjct 873 AACCCAACTCAGTGAGATCGCGCAGCAAATGATGATTTACAACTTGAAATTCGCCAGAGA 932
Query 148285 GCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAA 148344
| ||||| || || | ||| || | ||||| || ||||| || ||||||| |
Sbjct 933 GTACGCGACGTGTGTAGATGTTAGAAGTGTAGGGTTCGAATGACTCATTATTGCCCATGA 992
Query 148345 TCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGAT 148404
| ||||| || | || |||||||| || | ||| || || || | | ||| | |
Sbjct 993 TTTGCGCAGTTGAAGCGGTGGGCATAGGTGCAAGCAGGAGGGAATTCCTAACACCATGCT 1052
Query 148405 TTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACA 148464
||| ||||| ||||| | | ||||| ||||||| | || || | |||||
Sbjct 1053 GTTTAATTTTCTCCTTCAATTCTGTCCAGTTCCAGAGCTCAGTGGGCTTCTTATCCCACA 1112
Query 148465 TGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT 148524
|||| || || ||||| || |||| | || | ||| || || | || | ||||
Sbjct 1113 TGTCATATTGTAGAATTCCCTTGCTAACTGGACAGCCTTCATAAGTTTCATAGGTACCGT 1172
Query 148525 GCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTT 148584
| | |||| ||| || || || || | || || || ||||| || ||| ||
Sbjct 1173 ATTTCTCAGCCAATTCACAACTAGCTTCTAATGCACCATAATAAATGGTTTCGAAAA--- 1229
Query 148585 GCCTGTTGAGC----AGCGCCGCCGACTCGCTTTCGTACGGCATA-CGCAGCCGCACAAA 148639
|||||||| || || |||||||||||||| ||| |||| | | ||
Sbjct 1230 -CCTGTTGATTTAAAAGGAATGCTTGTTCGCTTTCGTACGG-ATAGCGCATAAGTATAAG 1287
Query 148640 CGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCG 148699
||||| |||| || |||||||| | || || || |||||| ||| ||| ||
Sbjct 1288 AGCGTCTGCAAAACCTTGTACGCCGATCCCGATTGGACGGTGTCTAAAGTTTGATTTTTT 1347
Query 148700 CGCGCTCTCGAGC---GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCAC 148756
|| |||| || || ||||| || || ||||| || | | ||| || |||
Sbjct 1348 TGC---CTCGGGCAATGGGTAGTGATTTATTTCAATGATTTTATTCAAATTTCGTGTCAC 1404
Query 148757 CACCTTTGTAA-TTCTGCGCAGCAATTCAAAATCGTAC---TTGTCATCTACGATGCATC 148812
|| || | ||| | ||| || |||||||| || ||| | || |
Sbjct 1405 AGTTTTGGTGACTTCCTTG-AGCCGTTGGAAATCGTAAGTTTTTTCAGGTGTGACAAACA 1463
Query 148813 GGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTA 148872
||||| ||||| || |||| ||||| || ||| |||||| || || || || |
Sbjct 1464 TGTTCAAAGCGATTGATGCTAAGTTGCATACAGCCACCTCATCAGGTGCAGAATATTCGA 1523
Query 148873 CGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGC 148932
| || || | ||| |||||||||||||| || ||| | || | ||||| || || |
Sbjct 1524 CAATTTCAGTGCATAGATTGCTGCATTTAATGGTGCCAATATTTTGCTGATTACTTTTTC 1583
Query 148933 TGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTC 148987
| || || || |||||||||| ||| || ||| || || |||||||| | |||
Sbjct 1584 TATTACAGGCATCCTTGTACAACATATAAGGTGTACCGGTCTCCACCTGGGATTC 1638
>seq280
Length=341618
Score = 118 bits (130), Expect = 1e-21
Identities = 152/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| ||||| || || || || |||||| || || | | | || |||||
Sbjct 104906 AAATGGAGGGTAGACTCCTTTTGGATGTTATAATCGGACAAAGTACGGCCA-TCTTCGAG 104964
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || | ||||| || || || ||||| ||||| ||||| |||
Sbjct 104965 CTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCTTTGTCCTGGAT 105024
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | ||| | ||||| | ||||| || || | ||||| |||||||||
Sbjct 105025 CTTGGCCTTAACGTTCTCGATGGTGTCTGACGGCTCAACCTCCAAGGTGATGGTTTTGCC 105084
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||| || |||||||| |||||
Sbjct 105085 AGTCAGAGTCTTGACGAAAATTTGCAT 105111
Score = 114 bits (126), Expect = 1e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | ||| ||||| || || || ||||| || || ||| | ||| ||||||
Sbjct 105362 AAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGACAAGGTGCGCCCGTCTTCGAGC 105421
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || |||| | || |||||||| ||||| || ||||||||||| |||
Sbjct 105422 TGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATC 105481
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | |||| ||||||| ||||| || || | ||| | ||||||||
Sbjct 105482 TTGGCCTTGACGTTTTCAATGGTGTCGGATGGCTCAACCTCCAAGGTTATAGTTTTGCCA 105541
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| || |||||
Sbjct 105542 GTCAGGGTCTTCACGAAGATTTGCAT 105567
Score = 114 bits (126), Expect = 1e-20
Identities = 154/209 (74%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || || || ||||| |||||||| || || ||| | | | ||||| |
Sbjct 106274 AAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCA-TCCTCCAA 106332
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| |||| | || || || || || ||||| |||||||| || |||
Sbjct 106333 CTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCC-TGAA 106391
Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| || | ||||| || |||| ||||| || || | |||| |||||| |
Sbjct 106392 TTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTAC 106451
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||| |||||| |||||||||||||||
Sbjct 106452 CCGTCAAAGTTTTGACGAAAATCTGCATG 106480
Score = 114 bits (126), Expect = 1e-20
Identities = 154/209 (74%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || || || ||||| |||||||| || || ||| | | | ||||| |
Sbjct 114520 AAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGACAATGTGCGTCCA-TCCTCCAA 114578
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| |||| | || || || || || ||||| |||||||| || |||
Sbjct 114579 CTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCC-TGAA 114637
Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| || | ||||| || |||| ||||| || || | |||| |||||| |
Sbjct 114638 TTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTAC 114697
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| |||| |||||| |||||||||||||||
Sbjct 114698 CCGTCAAAGTTTTGACGAAAATCTGCATG 114726
Score = 102 bits (112), Expect = 8e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||| ||||||||||| || || |||| | || |||||||| ||||| || ||||||||
Sbjct 113658 GTCTTCGAGCTGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCCTT 113717
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| ||||| ||||| | |||| ||||||| ||||| || || | ||| |
Sbjct 113718 GTCTTGAATCTTGGCCTTGACGTTTTCAATGGTGTCGGATGGCTCAACCTCCAAGGTTAT 113777
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||| ||||| || || ||||| || |||||
Sbjct 113778 AGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 113813
Score = 100 bits (110), Expect = 3e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| |||||||| ||||| || |||||| || ||| | | | || |||||
Sbjct 106046 AAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGACAAGGTGCGGCCA-TCTTCGAG 106104
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || | ||||| || || || ||||| |||||||| || |||
Sbjct 106105 CTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCCTTATCTTGGAT 106164
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || || | | || | || |||| || || || || | |||| ||||||||
Sbjct 106165 -TTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACCTCCAGAGTGATGGTTTTGC 106223
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| ||||| || || || |||||
Sbjct 106224 CAGTCAATGTTTTAACAAATATTTGCAT 106251
Score = 100 bits (110), Expect = 3e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| |||||||| ||||| || |||||| || ||| | | | || |||||
Sbjct 114292 AAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGACAAGGTGCGGCCA-TCTTCGAG 114350
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || | ||||| || || || ||||| |||||||| || |||
Sbjct 114351 CTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCCTTATCTTGGAT 114410
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || || | | || | || |||| || || || || | |||| ||||||||
Sbjct 114411 -TTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACCTCCAGAGTGATGGTTTTGC 114469
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| ||||| || || || |||||
Sbjct 114470 CAGTCAATGTTTTAACAAATATTTGCAT 114497
>seq53698
Length=1888
Score = 114 bits (126), Expect = 1e-20
Identities = 172/239 (72%), Gaps = 4/239 (2%)
Strand=Plus/Plus
Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010
|||||||| ||||||||||||||||| ||||||| ||| | || ||||| |||
Sbjct 1332 GTGCGCAGGTAGTACATGCCCGTCTTCAGGCCCAGTTTCCAGCCAAAGAAGTGCATCGAG 1391
Query 148011 GACATGAGCGTGTACGTCGGGTGCGGCACAAA-CAGATTAAACGACTGGCTCTGGTCAAT 148069
| || || ||||| | ||||| || || | |||||| |||||| ||
Sbjct 1392 GTGATCTTCGCCATGGTCGGCT-CGGCAATGTGCACGTTGAGCGACTGCGACTGGTCGAT 1450
Query 148070 GAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTAT-CTTCATCTCCCAGGCCG 148128
||| || || ||||| |||||||| || | || |||| || | | ||||||||| | |
Sbjct 1451 GAAGGCCCCGCGGTCGGCGGCCATCTCCA-GAATCGCCTTCTGCGGAATCTCCCAGACGG 1509
Query 148129 TCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGG 148187
||||||| || |||||| | |||||||| || |||||| ||||||||||||| ||
Sbjct 1510 TCTTGTAGAGGGCCTTGATGTCCTCGGGAATCTCGGCGATGCCCTGCACCGAGCCGTGG 1568
Score = 100 bits (110), Expect = 3e-16
Identities = 100/130 (77%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 148266 ACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAAC 148325
|||||||||||||||| |||||| || ||| || | ||| |||| |||| ||||
Sbjct 1720 ACCTGAAACTCGCCGGAGAGCACCCGTCGCGAGTAGATGTTATTCGTGTACGGCTCAATG 1779
Query 148326 GACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGC 148385
||||| |||||||| | ||||||||| |||| || |||||||| ||| | ||||||
Sbjct 1780 GACTCATTGTTGCCGAGAATCTGCGCCGTCGAGGCGGTGGGCATCGGCGCCAGCAGCAGA 1839
Query 148386 GAGTTGCGCA 148395
||||||||
Sbjct 1840 CTGTTGCGCA 1849
>seq8352
Length=27642
Score = 111 bits (122), Expect = 2e-19
Identities = 118/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 116457 CCTGCCGCGCGGCCTGCACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTG 116516
|||| ||| ||| |||||| || ||||| ||| |||| ||||||||| |||||||
Sbjct 21167 CCTGACGCCGGGCAAGCACGGTTTTCACGTCCACCAGTTCGGCGACACCTCGGACGGCTG 21226
Query 116517 CACCTCCGCCGGCGAACACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGC 116576
|||| | ||| |||| ||||||| |||| || |||||| |||||| | |||
Sbjct 21227 CACCAGCATGGGCCCGCACTACAACCCCGCCGGACACAGCCACGGGGCGCCCGGAGACGC 21286
Query 116577 CGTTCGTCACGTCGGTGACCTGGGCAACATTGAGGC 116612
|| || |||||||| |||||||||||||| |||||
Sbjct 21287 CGCCCGACACGTCGGCGACCTGGGCAACATCGAGGC 21322
>seq22380
Length=7273
Score = 109 bits (120), Expect = 5e-19
Identities = 105/132 (80%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 116485 GTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACACTTCAACCCC 116544
|| |||||||||||||||| || ||||||||||||||| | || | |||||||||||
Sbjct 6708 GTTCACGAGTTTGGCGACAACACCAACGGCTGCACCTCGTCTGGTGCTCACTTCAACCC- 6650
Query 116545 ACCGGCCAGGAC-CACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGACCTGGGCAA 116603
|| || || ||| ||||||| |||| | || | |||||||| || |||||||||||
Sbjct 6649 ACAGGGCAAGACTCACGGCGGCCCCACTGACGAGGAGCGTCACGTTGGCGACCTGGGCAA 6590
Query 116604 CATTGAGGCCAA 116615
| | ||||||||
Sbjct 6589 CGTGGAGGCCAA 6578
Score = 109 bits (120), Expect = 5e-19
Identities = 105/132 (80%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 116485 GTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACACTTCAACCCC 116544
|| |||||||||||||||| || ||||||||||||||| | || | |||||||||||
Sbjct 6937 GTTCACGAGTTTGGCGACAACACCAACGGCTGCACCTCGTCTGGTGCTCACTTCAACCC- 6879
Query 116545 ACCGGCCAGGAC-CACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGACCTGGGCAA 116603
|| || || ||| ||||||| |||| | || | |||||||| || |||||||||||
Sbjct 6878 ACAGGGCAAGACTCACGGCGGCCCCACTGACGAGGAGCGTCACGTTGGCGACCTGGGCAA 6819
Query 116604 CATTGAGGCCAA 116615
| | ||||||||
Sbjct 6818 CGTGGAGGCCAA 6807
>seq322
Length=316913
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||||| || || || || || |||||||||||| | | || | || || |
Sbjct 56223 AAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGCTAAGGTTCGCCCATCTTCTAAT 56282
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || ||| |||| || ||||| || || |||||||| ||||||||||| |||
Sbjct 56283 TGCTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGAGGGATCCCTTCCTTGTC-TTGAAT 56341
Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| | ||| | ||||||| || || | ||||| || || | || | || |||||
Sbjct 56342 TTTCGCCTTAACATGCTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGTCTTGCC 56401
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664
|| || || || |||||||| |||||||||
Sbjct 56402 CGTTAGGGTCTTAACGAAAATTTGCATGGCT 56432
>seq886
Length=177178
Score = 84.2 bits (92), Expect = 2e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 116473 CACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAA 116532
|| |||||||| |||||||| ||||| || | || ||| |||||||| || || ||
Sbjct 132136 CATGGCTTCCATGTGCACGAATTTGGAGATAACACCAATGGCTGCACATCGGCTGGTCCC 132077
Query 116533 CACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGT 116592
|| ||||| || | ||| | || || ||||| || | || || |||||| | |||
Sbjct 132076 CATTTCAATCCAGCTGGCAAAGAGCATGGCGCTCCAACCGACGAAAATCGTCATTTAGGT 132017
Query 116593 GACCTGGGCAACATTGAGGCC 116613
|| |||| ||||||||||||
Sbjct 132016 GATTTGGGTAACATTGAGGCC 131996
>seq21746
Length=7614
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| || || || ||||| ||| || || ||| | || || |
Sbjct 2401 AAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCGGACAAAGTACGACCA-TCTTCCAA 2343
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||||| ||| |||| | || || || || || || || ||||| || || |||
Sbjct 2342 TTGCTTGCCGGCGAAAATCAAACGTTGTTGATCTGGTGGTATACCTTCTTTATCTTGGAT 2283
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|| ||||| | || | ||||| | ||||| || || | |||| ||| |||||
Sbjct 2282 TTTAGCCTTGACATTTTCGATAGTGTCAGAAGGCTCGACCTCCAAAGTGATGGTCTTGCC 2223
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||||||||||||
Sbjct 2222 CGTAAGTGTTTTGACGAAAATCTGCAT 2196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482897073990800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |