Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_024794.1
Length=167318
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 199 4e-46
seq85787 118 1e-21
>seq81708
Length=1085
Score = 199 bits (220), Expect = 4e-46
Identities = 158/190 (83%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 61274 GCCATTATAGACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGTTGTTCCGGAGTCA 61333
|| |||| || || || ||||| ||||||| ||||| || ||||| || || || ||||
Sbjct 234 GCAATTACAGGCTTTCGGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCA 293
Query 61334 GAGAGTTAAAGCGAACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 61393
| | ||||||||| || ||||| ||||| || || ||||||| ||| |||||||||||||
Sbjct 294 GCGCGTTAAAGCGCACGGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCG 353
Query 61394 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGAC 61453
|||| || || |||||||||| |||||||||||||| ||||| ||||||||||| ||||
Sbjct 354 GATGGTTCACGGCATCTTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGAC 413
Query 61454 CACCTTCAAT 61463
||||||||||
Sbjct 414 CACCTTCAAT 423
>seq85787
Length=1013
Score = 118 bits (130), Expect = 1e-21
Identities = 130/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 61291 GTAAAGGTACGAGCGATAACGTCGCGCTGTTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 61350
|| || ||||| | || || || ||| || || ||| || ||||| ||||| ||
Sbjct 602 GTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCGAGTTGAAGCGTACA 661
Query 61351 GCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 61410
||||| || || || ||||||||||||||||||||||| |||||||| | | |||||
Sbjct 662 GCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGATGTTCCATGGCATCC 721
Query 61411 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 61463
||| | |||||| || ||||| |||||||| |||||||||||||| ||
Sbjct 722 AACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCACCTTCGAT 774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534709680629600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |