Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_025425.1
Length=163424
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 122 9e-23
seq85787 111 2e-19
>seq81708
Length=1085
Score = 122 bits (134), Expect = 9e-23
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 53979 AATTAGAGAGATTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGA 54038
||||| || ||||||||| ||||| | ||||| ||||||||||| ||||| |||||
Sbjct 236 AATTACAGGCTTTCGGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGC 295
Query 54039 CTATTGAAGCGCACTGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGA 54098
|| |||||||| || || || ||||||||||| || | ||| || || || || |||
Sbjct 296 GCGTTAAAGCGCACGGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGA 355
Query 54099 TGTTCAACAGCGTCCAGCAACATTTCTCGTAACAATACGTTAACATTCAAATGCTGGCCA 54158
|| | || || || |||| |||| || || |||||| || |||| ||||| |||
Sbjct 356 TGGTTCACGGCATCTTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGACCA 415
Query 54159 CCTTC 54163
|||||
Sbjct 416 CCTTC 420
>seq85787
Length=1013
Score = 111 bits (122), Expect = 2e-19
Identities = 136/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 53980 ATTAGAGAGATTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGAC 54039
|||| | || | ||| || ||||| | || || || |||||| ||| ||| ||
Sbjct 588 ATTACAACGACTGGGTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCG 647
Query 54040 TATTGAAGCGCACTGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGAT 54099
|||||||| || || || ||||||||||| || || |||||||| || ||||| ||||
Sbjct 648 AGTTGAAGCGTACAGCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGAT 707
Query 54100 GTTCAACAGCGTCCAGCAACATTTCTCGTAACAATACGTTAACATTCAAATGCTGGCCAC 54159
|||| | || |||| || ||| || || || |||||| || |||| ||| || ||||
Sbjct 708 GTTCCATGGCATCCAACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCAC 767
Query 54160 CTTCGA 54165
||||||
Sbjct 768 CTTCGA 773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 522262380348800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |