Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_025437.1 Length=169062 Score E Sequences producing significant alignments: (Bits) Value seq81708 208 8e-49 seq85787 114 1e-20 >seq81708 Length=1085 Score = 208 bits (230), Expect = 8e-49 Identities = 160/190 (84%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 62325 GCCATTATAGACTCTCAGTAAAGGTACGAGCGATAACGTCACGCTGCTGTTCCGGAGTCA 62384 || |||| || || || ||||| ||||||| ||||| ||||||||||| || || |||| Sbjct 234 GCAATTACAGGCTTTCGGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCA 293 Query 62385 GAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAACTGCGGATATTTTTCTG 62444 | | ||||||||| || ||||| ||||| || || ||||||||||| ||||||||||| | Sbjct 294 GCGCGTTAAAGCGCACGGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCG 353 Query 62445 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGAC 62504 |||| || || |||||||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct 354 GATGGTTCACGGCATCTTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGAC 413 Query 62505 CACCTTCAAT 62514 |||||||||| Sbjct 414 CACCTTCAAT 423 >seq85787 Length=1013 Score = 114 bits (126), Expect = 1e-20 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 62342 GTAAAGGTACGAGCGATAACGTCACGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 62401 || || ||||| | || || || |||||| || ||| || ||||| ||||| || Sbjct 602 GTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCGAGTTGAAGCGTACA 661 Query 62402 GCATAACCGGATACACGGATGGTCAACTGCGGATATTTTTCTGGATGCTTAACTGCATCT 62461 ||||| || || || |||||||||| |||||||||||| || ||||| | | ||||| Sbjct 662 GCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGATGTTCCATGGCATCC 721 Query 62462 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 62514 ||| | |||||| || ||||| |||||||| |||||||||||||| || Sbjct 722 AACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCACCTTCGAT 774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540284434530400