Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_025437.1
Length=169062
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 208 8e-49
seq85787 114 1e-20
>seq81708
Length=1085
Score = 208 bits (230), Expect = 8e-49
Identities = 160/190 (84%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62325 GCCATTATAGACTCTCAGTAAAGGTACGAGCGATAACGTCACGCTGCTGTTCCGGAGTCA 62384
|| |||| || || || ||||| ||||||| ||||| ||||||||||| || || ||||
Sbjct 234 GCAATTACAGGCTTTCGGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCA 293
Query 62385 GAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAACTGCGGATATTTTTCTG 62444
| | ||||||||| || ||||| ||||| || || ||||||||||| ||||||||||| |
Sbjct 294 GCGCGTTAAAGCGCACGGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCG 353
Query 62445 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGAC 62504
|||| || || |||||||||| |||||||||||||| ||||| ||||||||||| ||||
Sbjct 354 GATGGTTCACGGCATCTTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGAC 413
Query 62505 CACCTTCAAT 62514
||||||||||
Sbjct 414 CACCTTCAAT 423
>seq85787
Length=1013
Score = 114 bits (126), Expect = 1e-20
Identities = 129/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 62342 GTAAAGGTACGAGCGATAACGTCACGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 62401
|| || ||||| | || || || |||||| || ||| || ||||| ||||| ||
Sbjct 602 GTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCGAGTTGAAGCGTACA 661
Query 62402 GCATAACCGGATACACGGATGGTCAACTGCGGATATTTTTCTGGATGCTTAACTGCATCT 62461
||||| || || || |||||||||| |||||||||||| || ||||| | | |||||
Sbjct 662 GCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGATGTTCCATGGCATCC 721
Query 62462 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 62514
||| | |||||| || ||||| |||||||| |||||||||||||| ||
Sbjct 722 AACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCACCTTCGAT 774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 540284434530400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |