Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_025830.1
Length=120938
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 181 8e-41
seq85787 114 1e-20
>seq81708
Length=1085
Score = 181 bits (200), Expect = 8e-41
Identities = 150/183 (82%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166
||||||| || |||||||| ||||| |||||||| ||||| |||||||||| || || |
Sbjct 416 GTGGTCAGCACCTGAACGTAAACGTACTGCGTCGTGAAACGTTGGAAGATGCCGTGAACC 357
Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACT 109226
|||||||||||||||| ||| ||||||| || || ||||| ||||| || |||||||||
Sbjct 356 ATCCGGAAAAATATCCACAGTTGACCATTCGCGTTTCCGGCTATGCCGTGCGCTTTAACG 297
Query 109227 CTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCTATAAT 109286
| ||||| || || |||||||| || ||||| ||||||| ||||| || || || ||||
Sbjct 296 CGCTGACGCCAGAGCAGCAGCGTGATGTTATTACTCGTACATTTACCGAAAGCCTGTAAT 237
Query 109287 GGC 109289
||
Sbjct 236 TGC 234
>seq85787
Length=1013
Score = 114 bits (126), Expect = 1e-20
Identities = 125/166 (75%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166
||||||||||||||||||| ||||| || ||| || | ||| ||||| | | |
Sbjct 767 GTGGTCAACATCTGAACGTCAACGTAATGAATCGTGAGATGCTGTTGGATGCCATGGAAC 708
Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACT 109226
||||||| ||||||||||||||||||||||| || || || ||||| || ||||| ||||
Sbjct 707 ATCCGGAGAAATATCCGCAGCTGACCATCCGCGTTTCTGGCTATGCTGTACGCTTCAACT 648
Query 109227 CTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTAC 109272
| || ||| || |||||| || || || | ||||| || ||
Sbjct 647 CGCTCACTAAAGAGCAGCAGAAAGATGTAATTACACGTACTTTCAC 602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 386468145663130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |