Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_026014.1
Length=35814
Score E
Sequences producing significant alignments: (Bits) Value
seq69575 93.3 1e-14
>seq69575
Length=1340
Score = 93.3 bits (102), Expect = 1e-14
Identities = 196/292 (67%), Gaps = 3/292 (1%)
Strand=Plus/Plus
Query 12894 CGCCGCTGTCGCCGTTTCCACTGCTGCCGTTTGCGTCATACCCAATCCATACCGGACGAT 12953
|| |||||||||| || ||||| | ||||| | || ||||||||||| || || ||
Sbjct 222 CGGCGCTGTCGCCTTTGTCACTGTTACCGTTGGGATCGTACCCAATCCAGACAGGGCGGC 281
Query 12954 TCCCCATCGGGCGGGGAGCAAAAGGTTTCCAGTCTTTCCAGTCGTCG---TATCCATCAA 13010
| | | ||||| || || | || |||||||| |||| | || |||||||| |
Sbjct 282 TGGCGAGTGGGCGCGGGGCGTAGGGGTTCCAGTCAGGCCAGATGCCGCTATATCCATCCA 341
Query 13011 CACCGCAGCCAATCAGGATATTCAGGTTAAATGCCGATTCCCCTTCGCGGACAAACTCAC 13070
| ||||||||||| ||| || |||||| || ||| || | || || | ||
Sbjct 342 CGCCGCAGCCAATTAGGGCGTTGTAGTTAAACGCACGTTCACCGGCAACAACGAATTTAC 401
Query 13071 ACATATAGAGATTGCGGAACTCGTCTTCGGTGTTTTCATCACGAATTTCATCAATATCGG 13130
|||| ||||| || ||| || || ||| ||||||| || || || || | |||
Sbjct 402 ACATGTAGAGGTTATCGAAATCCTCATCGCTGTTTTCGCTGCGGATCTCTTCCAGGTCGA 461
Query 13131 TGTGTTTCCAGCCGTGATTAACCACATCTTCCAGCGTGACAATTTGCCGCCA 13182
| || |||| |||| | || || | | |||||||| ||||||||
Sbjct 462 TAAGTGGGAAGCCCTGATCGATGACGTCCTGAACGGTGACAATCTGCCGCCA 513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114365373175040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |