Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_026014.1 Length=35814 Score E Sequences producing significant alignments: (Bits) Value seq69575 93.3 1e-14 >seq69575 Length=1340 Score = 93.3 bits (102), Expect = 1e-14 Identities = 196/292 (67%), Gaps = 3/292 (1%) Strand=Plus/Plus Query 12894 CGCCGCTGTCGCCGTTTCCACTGCTGCCGTTTGCGTCATACCCAATCCATACCGGACGAT 12953 || |||||||||| || ||||| | ||||| | || ||||||||||| || || || Sbjct 222 CGGCGCTGTCGCCTTTGTCACTGTTACCGTTGGGATCGTACCCAATCCAGACAGGGCGGC 281 Query 12954 TCCCCATCGGGCGGGGAGCAAAAGGTTTCCAGTCTTTCCAGTCGTCG---TATCCATCAA 13010 | | | ||||| || || | || |||||||| |||| | || |||||||| | Sbjct 282 TGGCGAGTGGGCGCGGGGCGTAGGGGTTCCAGTCAGGCCAGATGCCGCTATATCCATCCA 341 Query 13011 CACCGCAGCCAATCAGGATATTCAGGTTAAATGCCGATTCCCCTTCGCGGACAAACTCAC 13070 | ||||||||||| ||| || |||||| || ||| || | || || | || Sbjct 342 CGCCGCAGCCAATTAGGGCGTTGTAGTTAAACGCACGTTCACCGGCAACAACGAATTTAC 401 Query 13071 ACATATAGAGATTGCGGAACTCGTCTTCGGTGTTTTCATCACGAATTTCATCAATATCGG 13130 |||| ||||| || ||| || || ||| ||||||| || || || || | ||| Sbjct 402 ACATGTAGAGGTTATCGAAATCCTCATCGCTGTTTTCGCTGCGGATCTCTTCCAGGTCGA 461 Query 13131 TGTGTTTCCAGCCGTGATTAACCACATCTTCCAGCGTGACAATTTGCCGCCA 13182 | || |||| |||| | || || | | |||||||| |||||||| Sbjct 462 TAAGTGGGAAGCCCTGATCGATGACGTCCTGAACGGTGACAATCTGCCGCCA 513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114365373175040