Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_027368.1 Length=33828 Score E Sequences producing significant alignments: (Bits) Value seq52999 145 2e-30 >seq52999 Length=1923 Score = 145 bits (160), Expect = 2e-30 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 15467 CCAGAACGGGTAAGCGGGGTGCATTTTGGTTGAAGGGGTGGAAAAGTACGTCTTGCGCCA 15526 ||||||||| || ||| |||| | | | || |||||||||||||| || | |||||| Sbjct 791 CCAGAACGGATAGGCGCTGTGCGTGAGGCTGGACGGGGTGGAAAAGTAGGTTTCGCGCCA 732 Query 15527 CTTCTTATGCGTGGCCATCGCTGAGGCGACTTTGTTCAGCTCGTCAAACTTGCCGATCCA 15586 |||||| ||| ||||| | || || ||||| | ||| || | |||||| |||||| Sbjct 731 CTTCTTGTGCAGCGCCATGCCGGACGCCACTTTCTGCAGTTCCTGAAACTTCGGGATCCA 672 Query 15587 GAAATACTCATCCACATACACATGGCCGTGGTAACTCTGCGCTGTTTTGCCATTGGTAGA 15646 |||||| ||||||| |||| || |||||| || |||||||| || | | ||||| Sbjct 671 GAAATATTCATCCAGGTACAGATTGCCGTGATAGCTCTGCGCGGTGCGGGCGTTGGTGCC 612 Query 15647 CAGGAAATGCAGCTCAGCGCCATTAGAAAGCGTCATCGGGTTGCC 15691 |||||||| ||| || || ||| ||||||||||||| ||| Sbjct 611 CAGGAAATACAGGCACGCACCGTTACTGAGCGTCATCGGGTCGCC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108016713986600