Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq13731 259 4e-64
seq280 138 1e-27
seq28390 111 1e-19
seq322 100 2e-16
seq76387 98.7 8e-16
seq2574 96.9 3e-15
seq22380 89.7 4e-13
>seq13731
Length=15303
Score = 259 bits (286), Expect = 4e-64
Identities = 1208/1886 (64%), Gaps = 65/1886 (3%)
Strand=Plus/Plus
Query 130399 GCCACTGTTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATA 130458
|| ||| || || || || ||||| || ||||| | || || ||||| || || || ||
Sbjct 553 GCGACTCTTGTCCACAGTAAATTGTATAGCATTTGCAGCAGGTTTGGTACGTAAGTAGTA 612
Query 130459 CATGCCTGTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGG-- 130516
||| |||||||| || || ||| ||||| || || | | | |||||
Sbjct 613 CATTCCTGTTTTTAGACCCGCTTTCCAGCCATAGAAATGTATA--GAAGTTAGTTTGCCA 670
Query 130517 TAATTGGGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTG 130576
|| || || | || || |||||| | |||||| ||| || || || || ||||
Sbjct 671 TAGTTTGGCTCTGCGACATGTATGTTAAACGATTGGCTTTGGTCGATGAATGCTCCCCGA 730
Query 130577 TCTGCAGCCATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCC 130636
||||| ||||| | | |||||| || ||||| | || ||||| |||||
Sbjct 731 TCTGCTGCCATTTTAATTGAAGTTTTAACCGAGATTTCCCATACAGTTTTGTACAGATCG 790
Query 130637 CTAATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCG 130696
| |||||| | |||||| | || ||| | | || | | | |||||||
Sbjct 791 CGAATGTGCTGCGGTATGGATTCTATGCCTTGTATGGAGCCACGGCTAGTAATAATTTTA 850
Query 130697 TTGCGCATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTA 130756
|| ||| | ||| |||| || | || ||||| | |||||||| |||
Sbjct 851 TTTTTCATGTCATCATCCCACAAACCCAACTCAGTGAGATCGCGCAGCAAATGATGATTT 910
Query 130757 ATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCA 130816
| | |||||| || |||| || ||||| | ||| ||||| ||| | |||||
Sbjct 911 ACAACTTGAAATTCGCCAGAGAGTACGCGACGTGTGTAGATGTTAGAAGTGTAGGGTTCG 970
Query 130817 AAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAAT 130876
|| || || || ||||| | ||||| || || | ||||||||||| ||| | |
Sbjct 971 AATGACTCATTATTGCCCATGATTTGCGCAGTTGAAGCGGTGGGCATAGGTGCAAGCAGG 1030
Query 130877 AGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGA 130936
|| ||||| | || ||| ||| | ||||| ||||||||| ||| | ||| ||
Sbjct 1031 AGGGAATTCCTAACACCATGCTGTTTAATTTTCTCCTTCAATTCTGTCCAGTTCCAGAGC 1090
Query 130937 GAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTG 130996
|| || || || | |||||| ||| ||||||| || || || || | |||| |
Sbjct 1091 TCAGTGGGCTTC---TTATCCCACATGTCATATTGTAGAATTCCCTTGCTAACTGGACAG 1147
Query 130997 GATTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCT 131056
||| | | ||| ||| | || | ||||| || |||||||| || ||
Sbjct 1148 CCTTCATAAGTTTCATAGGTACCGTATTTCTCAGCCAATTCACAACTAGCTTCTAATGCA 1207
Query 131057 CCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAA 131116
|| ||||||||||||||| || |||| |||||| | ||||| | ||| |||||
Sbjct 1208 CCATAATAAATGGTTTCGAAAACCTGTTGATTTAAAAGGAATGCTTGTTCGCTTTCGTAC 1267
Query 131117 GGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTA 131176
||| | ||| | |||| ||||||||| | ||| |||| || | || | || |
Sbjct 1268 GGATAGCGCATAAGTATAAGAGCGTCTGCAAAACCTTGTACGCCGATCCCGATTGGACGG 1327
Query 131177 TGTTTTAAATTACATTTACGCGAACATTCGG---TGGGATAAAGGTTAATGTCAATTATT 131233
||| | || || |||| | | | || |||| || | || || ||||| |||
Sbjct 1328 TGTCTAAAGTTTGATTTTTTTG--CCTCGGGCAATGGG-TAGTGATTTATTTCAATGATT 1384
Query 131234 TTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTG 131293
|| || ||||| || ||| ||| ||||| || | | |||||| | ||
Sbjct 1385 TTATTCAAATTTCGTGTCACAGTTTTGGTGACTTCCTTGAGCCGTTGGAAATCGTAAGT- 1443
Query 131294 CCAGTTTCGAGGT-TTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGT 131352
||| |||| | ||||| || | | ||||| || | || || || |||
Sbjct 1444 ---TTTTTCAGGTGTGACAAACATGTTCAAAGCGATTGATGCTAAGTTGCATACAGCCAC 1500
Query 131353 TTCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCC 131412
|| ||| | |||| | |||||||| | ||| | ||| |||| || ||||||||
Sbjct 1501 CTCATCAGGTGCAGAATATTCGACAATTTCAGTGCATAGATTGCTGCATTTAATGGTGCC 1560
Query 131413 CAAATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGC 131471
| |||||| ||||| ||||| ||| ||| | |||||||||| ||| || || || |
Sbjct 1561 AATATTTTGCTGATTACTTTTTCTATT-ACAGGCATCCTTGTACAACATATAAGGTGTAC 1619
Query 131472 CCGTTTCGACTTGAGTTTCAATAATG--TATCGAAAGAGTTTTCGAGCAGACAATTGATA 131529
| || || || || | |||||| ||| | | ||||| ||| |||| || |
Sbjct 1620 CGGTCTCCACCTGGGATTCAATGATGGCGAACCAAAGACTTT--GAGC-----TTTCACC 1672
Query 131530 TTTGTATTGGCCGCGT------TTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGG-- 131581
| |||| | ||||| ||||| || ||| || || |||| || | || |
Sbjct 1673 GTCTTATTAG-CGCGTCCTTCCTTTTCATACTTTGTATATAATTTTTCGAATTCTTCGCC 1731
Query 131582 CCAAACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTC 131641
|||||| ||| || ||||||| |||||||| | |||||| | |||||
Sbjct 1732 CCAAACCTCATGT--AAGCCAGGACATTTATGTGGACACATCAATGACCACTCTCCGTTA 1789
Query 131642 TGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCT 131701
||| || || | ||| || ||||| || | ||| || || || || | |||||| |||
Sbjct 1790 GCTTCCACACGTTCCATGAATAAATCTGGTATCCACAAAGCATAAAATAAATCTCTGGCT 1849
Query 131702 TTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGC 131761
| ||||||| | || || | || ||||||| ||||| || ||||| || ||||||
Sbjct 1850 CGGTGCTCTTCTTTTCCAGTATTCTTCTTCAAATCCAAAAACTCAAAAATATCTGCATGC 1909
Query 131762 CAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGA 131818
|| |||||||| || | || | ||||| ||||| ||| || |||| || | |
Sbjct 1910 CATGGTTCCAAGTAAATGGCAAAGGCGCCAGGCCGCTTGCCACCACCCTGATCTACGTAA 1969
Query 131819 CGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTG 131878
|| | | ||| ||| |||| |||||||| || ||||||| || | | ||||| |||
Sbjct 1970 CGTGCAACGTTATTGAATACCCGCAACATTGGTACCAAACCATTTGAAGTGCCATTTGTG 2029
Query 131879 CTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCG 131938
| | || |||| || |||| || || || || |||||||| || || |
Sbjct 2030 CCCGCGATTGCTGTGCCCTTTGCTCGTATGCAATGGACATTTAGTCCAATGCCACCAGCA 2089
Query 131939 TATTTAGAGATTAGTGCGCATT--TGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCG 131996
| || || |||| || |||| ||| ||| || || | ||||| || | | ||
Sbjct 2090 GACTTGGAAATTAAAGCACATTGGTGGGCAGA-TG-TAAATATACCATCAATGGAATCAC 2147
Query 131997 CGGCAAT-GTCGACTAAAAAGCAAGAGGACAA---CTGTTGGTGAAATGTGCCGGCTGAA 132052
| || || ||| | || || || || ||||| | ||||| || ||| | || | |
Sbjct 2148 CAGCCATAGTC-AATAGGAAACAGGATGACAATTGCGGTTGGCGA---GTGGCAGCAGCA 2203
Query 132053 AACAATGTGGGGCTGGCGTGTGT-AAAAAGTTTTTTGGCCATGC-ACCGATACGATTGTA 132110
|| | ||| || ||| ||||| ||| || || | | || | ||| | || |
Sbjct 2204 AAGAGTGTTGGAGAGGCATGTGTGAAATAGCGTTCCG--AAAGCAAGTTATAAGTTTCAA 2261
Query 132111 TAGCGGACTCGATATCGCCCAGATGTATGGTCAAT-GCGACCCGCATGTACATGTGTTGA 132169
|||||| || ||||| | ||| || |||| | || ||||| ||||||| ||
Sbjct 2262 TAGCGGCATCAATATCTTCACCATGAAT-ACCAATGGAAACACGCATTAACATGTGCTGC 2320
Query 132170 ATGCGCTCGGCCGTTTTGCCGTCGATTTTGATCAAATA--ACCGTTTTCCAAAGTTTTGA 132227
|| || | ||||||| | | |||| ||||| | || || | |||||||
Sbjct 2321 GGACGTTCAACAATTTTGCCATTCAACTTGAGTAAATAGGAACG--CTCAAGTGTTTTGA 2378
Query 132228 AACCAAAATATTTGTATTCATAATCA 132253
|||||||||| ||||| || |||||
Sbjct 2379 AACCAAAATAATTGTAACCAAAATCA 2404
>seq280
Length=341618
Score = 138 bits (152), Expect = 1e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| || ||||| | ||||| |||||||| || || || ||| || | |||| |
Sbjct 106037 CGCAGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGACAAGGTGCGGCCA 106096
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||||||||| || |||||| | || | |||||||||||| || || | ||| || |||
Sbjct 106097 TCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCCTTA 106156
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||| ||| ||||| |||| | ||| || | | |||||| || ||||| ||
Sbjct 106157 TCTTGGATTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACCTCCAGAGTGATG 106216
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251
| |||||| |||| ||||| ||||| ||||||||| ||
Sbjct 106217 GTTTTGCCAGTCAATGTTTTAACAAATATTTGCATACCT 106255
Score = 138 bits (152), Expect = 1e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| || ||||| | ||||| |||||||| || || || ||| || | |||| |
Sbjct 114283 CGCAGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGACAAGGTGCGGCCA 114342
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||||||||| || |||||| | || | |||||||||||| || || | ||| || |||
Sbjct 114343 TCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGGATACCTTCCTTA 114402
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||| ||| ||||| |||| | ||| || | | |||||| || ||||| ||
Sbjct 114403 TCTTGGATTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAACCTCCAGAGTGATG 114462
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251
| |||||| |||| ||||| ||||| ||||||||| ||
Sbjct 114463 GTTTTGCCAGTCAATGTTTTAACAAATATTTGCATACCT 114501
Score = 136 bits (150), Expect = 3e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| |||||||| | ||||| || ||||| || |||||||| || | |||| |
Sbjct 105809 CGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAGGTGCGGCCA 105868
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| |||||||| |||||| | || | |||||| ||||| || || | ||| || |||
Sbjct 105869 TCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTA 105928
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTAT 27211
|| ||||||| ||| | |||| | ||||||| ||||| |||| || | || ||
Sbjct 105929 TCTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCT-CAACCTCCAAGGTGAT 105987
Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||||| || || || ||||| ||||||||||||
Sbjct 105988 AGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCATA 106024
Score = 136 bits (150), Expect = 3e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| |||||||| | ||||| || ||||| || |||||||| || | |||| |
Sbjct 114055 CGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAGACAAGGTGCGGCCA 114114
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| |||||||| |||||| | || | |||||| ||||| || || | ||| || |||
Sbjct 114115 TCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTA 114174
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTAT 27211
|| ||||||| ||| | |||| | ||||||| ||||| |||| || | || ||
Sbjct 114175 TCTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCT-CAACCTCCAAGGTGAT 114233
Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||||| || || || ||||| ||||||||||||
Sbjct 114234 AGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCATA 114270
Score = 131 bits (144), Expect = 1e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| |||||||| | ||||| || ||||| || |||||||| || | ||||| ||
Sbjct 105353 CGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGACAAGGTGCGCCCG 105412
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||||||||| ||||| || |||| | ||| || || || || || | ||| || ||
Sbjct 105413 TCTTCGAGCTGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCCTTG 105472
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTAT 27211
|| |||||| || | | |||| | ||||| | |||| ||||| || | |||||
Sbjct 105473 TCTTGAATCTTGGCCTTGACGTTTTCAATGGTGTCGGATGGC-TCAACCTCCAAGGTTAT 105531
Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| |||||| ||||| || ||||| |||||||||||
Sbjct 105532 AGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 105567
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||||||||| | || | |||||||| | || || || || |||||||||||||||
Sbjct 104656 GCCTCCGCGAAGACGAAGCACCAAATGGAGAGTCGATTCCTTCTGAATATTGTAGTCGGA 104715
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
|| | || ||||||| | |||||||||||| |||| | |||||||||||| || ||
Sbjct 104716 CAAAGTACGGCCGTCTTCCAACTGTTTACCGGCAAAAATCAAACGCTGTTGATCTGGAGG 104775
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||| || ||||| ||| ||| ||| | |||| | ||||||| | |||||
Sbjct 104776 AATACCTTCCTTATCCTGGATTTTGGCTTTAACATTTTCGATGGTGTCTGACGGCTCAAC 104835
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | || || | ||| || ||||| || ||||| ||||| ||||||
Sbjct 104836 CTCCAAGGTGATGGTTTTACCGGTCAGTGTCTTCACGAAGATCTGCATA 104884
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||| | |||| |||||||| | ||||| || ||||| || |||||||| |
Sbjct 105113 CCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAC 105172
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| ||||||| | |||||||||||| |||| | ||| |||||||| || ||
Sbjct 105173 AAGGTGCGGCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGGA 105232
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || |||||||| |||||| || | | |||| | ||||||| | |||||
Sbjct 105233 ATGCCTTCTTTATCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGACGGCTCAACC 105292
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | || || | ||| || || || || ||||| ||||||||||||
Sbjct 105293 TCCAAGGTGATGGTTTTACCAGTTAGGGTCTTCACGAAGATTTGCATA 105340
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||| | |||| |||||||| | ||||| || ||||| || || || ||| |
Sbjct 104885 CCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTATAATCGGAC 104944
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || | ||||||||||| || |||||| | || | |||||||||||| || ||
Sbjct 104945 AAAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGG 105004
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| ||||| || ||||||| || | | | || | ||||||| | |||||
Sbjct 105005 ATACCTTCTTTGTCCTGGATCTTGGCCTTAACGTTCTCGATGGTGTCTGACGGCTCAACC 105064
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| | || || | |||||| |||||||| || || || |||||||||
Sbjct 105065 TCCAAGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAAATTTGCATA 105112
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||| ||| | ||||| || ||||| || ||||| ||| || | |||| |||||||
Sbjct 106499 ACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGACAAGGTGCGTCCGTCTTCC 106558
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
| ||||| ||||| | || | ||| || ||||| || || | ||||||||| ||
Sbjct 106559 AATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCTTGA 106618
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| ||| | | || | ||| || | | |||||| || ||||| || | |||
Sbjct 106619 ATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTG 106678
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| |||| ||| ||||| |||||||||||
Sbjct 106679 CCAGTCAAAGTCTTCACGAAGATTTGCAT 106707
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||| ||| | ||||| || ||||| || ||||| ||| || | |||| |||||||
Sbjct 114745 ACCAGATGAAGTGTAGACTCCTTTTGGATGTTGTAATCGGACAAGGTGCGTCCGTCTTCC 114804
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
| ||||| ||||| | || | ||| || ||||| || || | ||||||||| ||
Sbjct 114805 AATTGTTTGCCGGCAAAGATTAAACGTTGCTGATCTGGTGGAATACCCTCTTTGTCTTGA 114864
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| ||| | | || | ||| || | | |||||| || ||||| || | |||
Sbjct 114865 ATCTTGGCTTTTACATTCTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTTG 114924
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| |||| ||| ||||| |||||||||||
Sbjct 114925 CCAGTCAAAGTCTTCACGAAGATTTGCAT 114953
Score = 93.3 bits (102), Expect = 4e-14
Identities = 117/158 (74%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150
||||||||||||| ||||| || |||| | ||| || || || || || | ||| || |
Sbjct 113657 CGTCTTCGAGCTGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCCT 113716
Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTT 27209
| || |||||| || | | |||| | ||||| | |||| ||||| || | |||
Sbjct 113717 TGTCTTGAATCTTGGCCTTGACGTTTTCAATGGTGTCGGATGGC-TCAACCTCCAAGGTT 113775
Query 27210 ATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|||| |||||| ||||| || ||||| |||||||||||
Sbjct 113776 ATAGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 113813
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | ||||| || ||||| || ||||| || || |||||||||||||| |
Sbjct 106253 CCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGAC 106312
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || || | ||| || || ||| |||| | ||| |||||||| || ||
Sbjct 106313 AATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGG 106372
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || || ||||| || || ||| | | || | || || | | |||||
Sbjct 106373 ATTCCTTCCTTATCCTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACC 106432
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | ||| || | ||| ||||||| |||||| || || || |||||
Sbjct 106433 TCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCAT 106479
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | ||||| || ||||| || ||||| || || |||||||||||||| |
Sbjct 114499 CCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGAC 114558
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || || | ||| || || ||| |||| | ||| |||||||| || ||
Sbjct 114559 AATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGG 114618
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || || ||||| || || ||| | | || | || || | | |||||
Sbjct 114619 ATTCCTTCCTTATCCTGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACC 114678
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | ||| || | ||| ||||||| |||||| || || || |||||
Sbjct 114679 TCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCAT 114725
>seq28390
Length=4902
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || || ||||||||||| | | |||| |||| |||
Sbjct 516 ACCAAGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 457
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||||||||||||| | ||||||||||| || || || || | ||||| || || |
Sbjct 456 AGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 397
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| |||| | || | || || | || || || || || || || | |||
Sbjct 396 ATCTTTGCCTTCACATTCTCGATCGTATCAGAGGGCTCGACCTCGAGGGTGATGGTCTTG 337
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||||| || || |||||||||||||||||
Sbjct 336 CCCGTGAGGGTCTTCACAAAGATTTGCAT 308
>seq322
Length=316913
Score = 100 bits (110), Expect = 2e-16
Identities = 164/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
||||| | | ||| | ||| |||||||| ||||| || |||||||||||||| || |||
Sbjct 56202 CCTCCCCTGAGCCGAAGTACTAAATGTAAAGTAGATTCCTTTTGAATATTGTAATCGGCT 56261
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| ||| | ||||| | || || || ||| |||| || ||||||||||| || ||
Sbjct 56262 AAGGTT-CGCCCATCTTCTAATTGCTTTCCTGCGAAAATTAGGCGCTGTTGATCTGGAGG 56320
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| || || || || || || || | || | || || | | |||||
Sbjct 56321 GATCCCTTCCTTGTCTTGAATTTTCGCCTTAACATGCTCAATTGTATCCGAAGGCTCAAC 56380
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
|| ||||| |||| |||||||| || || || || || |||||||| |||||
Sbjct 56381 CTCAAGAGTAATAGTCTTGCCCGTTAGGGTCTTAACGAAAATTTGCATGGCTGC 56434
>seq76387
Length=1185
Score = 98.7 bits (108), Expect = 8e-16
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119
||||| || ||||||||||| | | |||| |||| ||||| || || || ||| | |||
Sbjct 573 TTTTGGATGTTGTAGTCGCTGAGGGTGCGACCGTCCTCGAGTTGCTTGCCAGCGAAGATG 632
Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179
|||||||| || ||||| || | ||||| || || |||||| |||| | ||
Sbjct 633 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCA 692
Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239
| ||||| ||| || || || ||||| || | ||||| || || || || || |||
Sbjct 693 ATGGTGTCGCTGGGCTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAG 752
Query 27240 ATTTGCATA 27248
|| ||||||
Sbjct 753 ATCTGCATA 761
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||||| || | |||| || | || || || || || || ||||| ||
Sbjct 762 CCACCGCGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 821
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| |||| |||||||| || || ||| | ||||||||||| || ||||| ||
Sbjct 822 AGGGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 881
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || |||||| |||| | || | || || ||| || ||
Sbjct 882 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTATCGCTGGGCTCCACC 941
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | ||||| || || || ||||||||||| |||||
Sbjct 942 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 988
>seq2574
Length=80092
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119
|| || || ||||||||||||| | || |||| |||||||| || |||||| | ||
Sbjct 58862 TTCTGGATGTTGTAGTCGCTCAGCGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 58921
Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179
|| ||||| || || ||||| | ||||| || || ||||||| |||| | ||
Sbjct 58922 AGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCG 58981
Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239
| ||||| ||| || || || || || || | |||||||| || || ||||| |||
Sbjct 58982 ATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 59041
Query 27240 ATTTGCAT 27247
|| |||||
Sbjct 59042 ATCTGCAT 59049
>seq22380
Length=7273
Score = 89.7 bits (98), Expect = 4e-13
Identities = 95/123 (77%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 96906 GTACACGAGTTTGGCGACACGAGCAACGGCTGCACTTCGGCCGGCGAACATTTCAACCCT 96965
|| |||||||||||||||| | |||||||||||| ||| | || | || ||||||||
Sbjct 6708 GTTCACGAGTTTGGCGACAACACCAACGGCTGCACCTCGTCTGGTGCTCACTTCAACCC- 6650
Query 96966 ACATTGCAA-AATCACGGCGCACCCAGCGCCATTGAACGCCACGTTGGTGATCTGGGCAA 97024
||| |||| | |||||||| |||| | | || || |||||||| || ||||||||
Sbjct 6649 ACAGGGCAAGACTCACGGCGGCCCCACTGACGAGGAGCGTCACGTTGGCGACCTGGGCAA 6590
Query 97025 CGT 97027
|||
Sbjct 6589 CGT 6587
Score = 89.7 bits (98), Expect = 4e-13
Identities = 95/123 (77%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 96906 GTACACGAGTTTGGCGACACGAGCAACGGCTGCACTTCGGCCGGCGAACATTTCAACCCT 96965
|| |||||||||||||||| | |||||||||||| ||| | || | || ||||||||
Sbjct 6937 GTTCACGAGTTTGGCGACAACACCAACGGCTGCACCTCGTCTGGTGCTCACTTCAACCC- 6879
Query 96966 ACATTGCAA-AATCACGGCGCACCCAGCGCCATTGAACGCCACGTTGGTGATCTGGGCAA 97024
||| |||| | |||||||| |||| | | || || |||||||| || ||||||||
Sbjct 6878 ACAGGGCAAGACTCACGGCGGCCCCACTGACGAGGAGCGTCACGTTGGCGACCTGGGCAA 6819
Query 97025 CGT 97027
|||
Sbjct 6818 CGT 6816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424485545777040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |