Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq32170 91.5 5e-13 >seq32170 Length=3971 Score = 91.5 bits (100), Expect = 5e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || || | ||||||| || |||||||| || || || || ||| ||| Sbjct 3614 CCGATGCTGCGCGTCTACAACAACACCGCCCGCTACGTGGACCAGGGCGGGAACAAGCGC 3673 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || || ||||| |||||||||| || ||||||||||||||||| |||| | Sbjct 3674 CCGGGGGCGTTTGCCATCTACCTCGAACCGTGGCACGCCGACATCTTCGAGTTTCTCGAC 3733 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCT-G 255159 ||| | | || |||||| | |||||||| ||||||||| ||| | ||| | | | Sbjct 3734 CTGCGCAAGAACACCGGCTCGGAGGAGCTCCGTGCCCGCGACCTCTTCTACGCCATGTGG 3793 Query 255160 GTGCTGCGATCTGTTTATGCGACGCGT 255186 |||| | || || |||||| ||||| Sbjct 3794 GTGCCG-GACCTCTTTATGAAGCGCGT 3819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1586572217398150