Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq32170 91.5 5e-13
>seq32170
Length=3971
Score = 91.5 bits (100), Expect = 5e-13
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | || || | ||||||| || |||||||| || || || || ||| |||
Sbjct 3614 CCGATGCTGCGCGTCTACAACAACACCGCCCGCTACGTGGACCAGGGCGGGAACAAGCGC 3673
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100
|| || ||||| |||||||||| || ||||||||||||||||| |||| |
Sbjct 3674 CCGGGGGCGTTTGCCATCTACCTCGAACCGTGGCACGCCGACATCTTCGAGTTTCTCGAC 3733
Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCT-G 255159
||| | | || |||||| | |||||||| ||||||||| ||| | ||| | | |
Sbjct 3734 CTGCGCAAGAACACCGGCTCGGAGGAGCTCCGTGCCCGCGACCTCTTCTACGCCATGTGG 3793
Query 255160 GTGCTGCGATCTGTTTATGCGACGCGT 255186
|||| | || || |||||| |||||
Sbjct 3794 GTGCCG-GACCTCTTTATGAAGCGCGT 3819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1586572217398150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |