Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq76387 188 8e-43
seq280 187 3e-42
seq322 174 2e-38
seq28390 170 2e-37
seq4881 158 1e-33
seq4530 152 6e-32
seq21746 136 5e-27
seq2574 131 2e-25
seq53698 113 5e-20
seq7596 100 3e-16
seq32170 84.2 2e-11
>seq76387
Length=1185
Score = 188 bits (208), Expect = 8e-43
Identities = 178/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || ||||||||||| || || || ||||| ||| | |
Sbjct 988 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGC 929
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| ||||||| || || |||||||||||||| || || || ||||||
Sbjct 928 GATACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 869
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| |||||||| | ||| ||||| | || || ||
Sbjct 868 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACCCTCTCGGATTACAAC 809
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| ||||| || || | ||||| ||||||||
Sbjct 808 ATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGCGCGGTGG 762
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || ||||| ||||| ||| | |
Sbjct 415 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGAGCCCAGC 356
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||||| || || || ||||||||||| ||||| || ||||||
Sbjct 355 GACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAG 296
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| |||||||| | || ||||| | ||||| ||
Sbjct 295 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACCCTCTCGGACTACAAC 236
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| ||||| || || || ||| | ||||| ||||| ||
Sbjct 235 ATCCAAAAGGAGTCCACCCTCCACCTGGTCCTTCGTCTGCGCGGCGG 189
Score = 170 bits (188), Expect = 2e-37
Identities = 154/191 (81%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || ||||| ||||| ||| | |
Sbjct 760 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGAGCCCAGC 701
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||||| || || || ||||||||||| ||||| || ||||||
Sbjct 700 GACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAG 641
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|||||||| || || ||||| |||||||||||||| | ||| ||||| ||| ||||| ||
Sbjct 640 CAGCGTCTCATCTTCGCTGGCAAGCAACTCGAGGACGGTCGCACCCTCAGC-GACTACAA 582
Query 27585 TGTCCAAAAGG 27595
|||||||||
Sbjct 581 CATCCAAAAGG 571
Score = 84.2 bits (92), Expect = 2e-11
Identities = 77/95 (81%), Gaps = 2/95 (2%)
Strand=Plus/Minus
Query 27502 AAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGAT 27561
|||||||| || ||||| ||||||||||| || || || ||||| ||||| ||||||||
Sbjct 1185 AAGGAGGGCATCCCTCCGGACCAGCAGCGACTCATCTTCGCTGGCAAGCAGCTCGAGGAC 1126
Query 27562 GATCGTACCCT-AGCAGACTATAATGTCCAAAAGG 27595
| ||| || || ||| ||||| || |||||||||
Sbjct 1125 GGTCGCACTCTGAGC-GACTACAACATCCAAAAGG 1092
>seq280
Length=341618
Score = 187 bits (206), Expect = 3e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || ||||| || || ||||| ||||| || | ||||||||| ||
Sbjct 105568 AATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGAGCCATC 105509
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| ||| | ||||| || ||||| |||||||| || ||||||||||||||
Sbjct 105508 CGACACCATTGAAAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCA 105449
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| ||| | ||||||||||||||||| ||||| || | || ||| | | ||||| ||
Sbjct 105448 GCAACGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACGGGCGCACCTTGTCGGACTACAA 105389
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || || || ||| | ||| ||||||| || |||||
Sbjct 105388 CATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGTCTCCGTGGTGG 105341
Score = 159 bits (176), Expect = 4e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || || || || || || || | ||||||||| ||
Sbjct 105795 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCC 105736
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | || ||||| || |||||||||||||| ||||||||||| |||
Sbjct 105735 GACACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAG 105676
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| |||| || || || ||||||||||| |||| || ||| | | ||||| ||
Sbjct 105675 CAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACAAC 105616
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||||||||| || || || || | || ||||||| ||||| |||
Sbjct 105615 ATCCAAAAGGAGTCTACGCTCCACTTGGTTCTGCGTCTGCGCGGAGGA 105568
Score = 159 bits (176), Expect = 4e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || || || || || || || | ||||||||| ||
Sbjct 114041 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCC 113982
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | || ||||| || |||||||||||||| ||||||||||| |||
Sbjct 113981 GACACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAG 113922
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| |||| || || || ||||||||||| |||| || ||| | | ||||| ||
Sbjct 113921 CAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACAAC 113862
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||||||||| || || || || | || ||||||| ||||| |||
Sbjct 113861 ATCCAAAAGGAGTCTACGCTCCACTTGGTTCTGCGTCTGCGCGGAGGA 113814
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || || ||||| ||||| || | ||||||||| ||
Sbjct 106023 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCA 105964
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | |||| | || || || || || || ||||| || ||||| ||||| |||
Sbjct 105963 GACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 105904
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || || || || || |||| || ||| | | ||||| ||
Sbjct 105903 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAAC 105844
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || ||||| ||| | ||| |||||||||| |||||
Sbjct 105843 ATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCGTCTTCGTGGTGG 105797
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || || ||||| ||||| || | ||||||||| ||
Sbjct 114269 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCA 114210
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | |||| | || || || || || || ||||| || ||||| ||||| |||
Sbjct 114209 GACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 114150
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || || || || || || || |||| || ||| | | ||||| ||
Sbjct 114149 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAAC 114090
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || ||||| ||| | ||| |||||||||| |||||
Sbjct 114089 ATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCGTCTTCGTGGTGG 114043
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || ||||| | || |||||||| || ||||| |||||||| ||
Sbjct 106708 AATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCATC 106649
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| |||| ||| | || || || ||||| ||||| ||||| ||||| ||||| ||
Sbjct 106648 CGATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATTCCACCAGATCA 106589
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| ||| |||| ||||| || || ||| | || || | || ||| | | || || ||
Sbjct 106588 GCAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTGTCCGATTACAA 106529
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || || |||||||| || | ||||| || |||||
Sbjct 106528 CATCCAAAAGGAGTCTACACTTCATCTGGTTCTTCGTCTACGTGGTGG 106481
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || ||||| | || |||||||| || ||||| |||||||| ||
Sbjct 114954 AATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCATC 114895
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| |||| ||| | || || || ||||| ||||| ||||| ||||| ||||| ||
Sbjct 114894 CGATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATTCCACCAGATCA 114835
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| ||| |||| ||||| || || ||| | || || | || ||| | | || || ||
Sbjct 114834 GCAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTGTCCGATTACAA 114775
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || || |||||||| || | ||||| || |||||
Sbjct 114774 CATCCAAAAGGAGTCTACACTTCATCTGGTTCTTCGTCTACGTGGTGG 114727
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || ||||| || || || | ||||||||| |
Sbjct 105111 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCGTCA 105052
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||||| || || |||||||| || || || || ||||| ||
Sbjct 105051 GACACCATCGAGAACGTTAAGGCCAAGATCCAGGACAAAGAAGGTATCCCACCAGATCAA 104992
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| |||| || || || ||||| ||||| |||| ||||| | | || |||||
Sbjct 104991 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTTTGTCCGATTATAAC 104932
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || || || ||| | ||| ||||||||||||||||
Sbjct 104931 ATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGTCTTCGCGGTGG 104885
Score = 147 bits (162), Expect = 2e-30
Identities = 126/156 (81%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || ||||| || || ||||| ||||| || | ||||||||| ||
Sbjct 113814 AATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGAGCCATC 113755
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| ||| | ||||| || ||||| |||||||| || ||||||||||||||
Sbjct 113754 CGACACCATTGAAAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCA 113695
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560
||| ||| | ||||||||||||||||| ||||| ||
Sbjct 113694 GCAACGTTTGATTTTTGCTGGTAAGCAGCTCGAAGA 113659
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||| || || || || | ||||||||| |
Sbjct 104883 ATGCAGATCTTCGTGAAGACACTGACCGGTAAAACCATCACCTTGGAGGTTGAGCCGTCA 104824
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | |||| | || || ||||| ||||| ||||| || ||||||||||| ||
Sbjct 104823 GACACCATCGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGTATTCCTCCAGATCAA 104764
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | |||||||| ||||| || | || || | ||||| | | ||||| |||
Sbjct 104763 CAGCGTTTGATTTTTGCCGGTAAACAGTTGGAAGACGGCCGTACTTTGTCCGACTACAAT 104704
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| ||||| ||| | || | ||||||||||| ||
Sbjct 104703 ATTCAGAAGGAATCGACTCTCCATTTGGTGCTTCGTCTTCGCGGAGG 104657
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || || || || || || || | ||||||||| |
Sbjct 105339 ATGCAAATCTTCGTGAAGACCCTAACTGGTAAAACCATCACCTTGGAGGTTGAGCCGTCA 105280
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||||| || ||||| || || || || ||||||||||| ||
Sbjct 105279 GACACCATCGAAAACGTCAAGGCCAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 105220
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | ||||| || ||||| ||| | || || | || ||| | | ||||| ||
Sbjct 105219 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGCCGCACCTTGTCGGACTACAAC 105160
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || || || ||| | ||| ||||||||||||||||
Sbjct 105159 ATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGTCTTCGCGGTGG 105113
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || ||||| || | || || || || || ||| | ||||||||| |
Sbjct 106479 ATGCAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCC 106420
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | || |||||||||||||| ||||| ||||| || ||||| ||
Sbjct 106419 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAA 106360
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| ||||||| ||||| ||||| | ||||||| || || | | ||||| |||
Sbjct 106359 CAACGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAAT 106300
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| || | ||| |||| ||||| || || || ||
Sbjct 106299 ATTCAGAAGGAATCTACATTGCATTTAGTTTTGCGCCTACGTGGAGG 106253
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || ||||| || | || || || || || ||| | ||||||||| |
Sbjct 114725 ATGCAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCC 114666
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | || |||||||||||||| ||||| ||||| || ||||| ||
Sbjct 114665 GATACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAA 114606
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| ||||||| ||||| ||||| | ||||||| || || | | ||||| |||
Sbjct 114605 CAACGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAAT 114546
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| || | ||| |||| ||||| || || || ||
Sbjct 114545 ATTCAGAAGGAATCTACATTGCATTTAGTTTTGCGCCTACGTGGAGG 114499
>seq322
Length=316913
Score = 174 bits (192), Expect = 2e-38
Identities = 164/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || || ||||||||||||||||||||||||||| |
Sbjct 56428 ATGCAAATTTTCGTTAAGACCCTAACGGGCAAGACTATTACTCTTGAGGTTGAGCCTTCG 56369
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | ||||| |||||||| |||||||| || || |||||||| ||
Sbjct 56368 GATACAATTGAGCATGTTAAGGCGAAAATTCAAGACAAGGAAGGGATCCCTCCAGATCAA 56309
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| |||||||| || || |||||| | || |||| || ||| |||| || || |||
Sbjct 56308 CAGCGCCTAATTTTCGCAGGAAAGCAATTAGAAGATGGGCGAACCTTAGCCGATTACAAT 56249
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
| ||||||||||| ||| | ||| ||||
Sbjct 56248 ATTCAAAAGGAATCTACTTTACATTTAGT 56220
Score = 152 bits (168), Expect = 6e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || || |||||||||||||||||||||||||| |
Sbjct 38533 ATGCAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCTTCG 38592
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || ||||||| |||||||| ||||||| || || || ||||| ||
Sbjct 38593 GATACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGATCAA 38652
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| |||||||| || || || ||| || |||| || ||| |||| | || |||
Sbjct 38653 CAGCGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTACAAT 38712
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
| ||||||||||| ||| | ||| ||||
Sbjct 38713 ATTCAAAAGGAATCTACTTTACATTTAGT 38741
>seq28390
Length=4902
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| ||||| || || |||||||| || || || ||||| ||| | |
Sbjct 308 ATGCAAATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGCCCTCT 367
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| ||||||| || || |||||||||||||| || ||||| ||||||
Sbjct 368 GATACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 427
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || ||||| || |||||||| | || ||||| | ||||| |||
Sbjct 428 CAGCGTCTCATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAT 487
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || | ||| | || || || |||||
Sbjct 488 ATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCGACTCCGTGGTGG 534
>seq4881
Length=46776
Score = 158 bits (174), Expect = 1e-33
Identities = 209/290 (72%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 31961 AGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACG 32020
|||| |||||||| ||| |||||| |||||||| |||||||||||| | |
Sbjct 36897 AGCGCTCCATTCCGTCGCTGGTGGACGGGCTCAAGCCGGGCCAGCGCAAGGTGCTCTTTA 36956
Query 32021 CCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGG 32080
||||| ||||| ||| | | || | ||||||||||||||| | |||| ||||
Sbjct 36957 CCTGCTTCAAGCGCAACGACAAGCGCGAGGTCAAGGTGGCGCAGCTGGCCGGCTCGGTGG 37016
Query 32081 CAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTG 32140
||||| | ||||| ||||||||||||| |||||| | ||||| ||||||| |
Sbjct 37017 GCGAGCACAGCGCCTACCACCACGGCGAGGTCTCGCTCATGTCGACCATCATCAACCTGG 37076
Query 32141 CTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGA 32200
| ||| |||||||||| || ||| | ||| | || ||| ||| |||||||| |
Sbjct 37077 CGCAGGACTTTGTCGGCAGCAACAACATTAACCTGCTGATGCCCATTGGCCAGTTTGGCA 37136
Query 32201 CCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACC 32250
|||| || || |||||||| || || ||| ||||||||||||| |||
Sbjct 37137 CCCGCCTGCAGGGCGGCAAGGACGCCGCCAGCGCCCGTTACATCTTTACC 37186
>seq4530
Length=49833
Score = 152 bits (168), Expect = 6e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || || |||||||||||||||||||||||||| |
Sbjct 18307 ATGCAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCTTCG 18366
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || ||||||| |||||||| ||||||| || || || ||||| ||
Sbjct 18367 GATACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGATCAA 18426
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| |||||||| || || || ||| || |||| || ||| |||| | || |||
Sbjct 18427 CAGCGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTACAAT 18486
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
| ||||||||||| ||| | ||| ||||
Sbjct 18487 ATTCAAAAGGAATCTACTTTACATTTAGT 18515
>seq21746
Length=7614
Score = 136 bits (150), Expect = 5e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || ||||| || ||||| |||||||| || ||| | ||||| ||| |
Sbjct 2195 AATGCAGATTTTCGTCAAAACACTTACGGGCAAGACCATCACTTTGGAGGTCGAGCCTTC 2254
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | || | |||| | ||||||||||| || || || || || || || ||||| ||
Sbjct 2255 TGACACTATCGAAAATGTCAAGGCTAAAATCCAAGATAAAGAAGGTATACCACCAGATCA 2314
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||| | ||||| || || |||||| | || |||| |||||| | | ||||| ||
Sbjct 2315 ACAACGTTTGATTTTCGCCGGCAAGCAATTGGAAGATGGTCGTACTTTGTCCGACTACAA 2374
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || || || | || |||||||| || |||||
Sbjct 2375 CATTCAAAAGGAGTCAACCCTCCACTTGGTGTTGCGTCTGCGTGGTGG 2422
>seq2574
Length=80092
Score = 131 bits (144), Expect = 2e-25
Identities = 145/191 (76%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || |||||||| || || || ||||| ||| | |
Sbjct 59049 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGCCCAGC 58990
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| ||||||| || || |||||||||||||| || || || ||||||
Sbjct 58989 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 58930
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || || || || || ||||| |||||||| | || || || ||| ||||| ||
Sbjct 58929 CAGCGACTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACGCTGAGC-GACTACAA 58871
Query 27585 TGTCCAAAAGG 27595
|||| ||||
Sbjct 58870 CATCCAGAAGG 58860
>seq53698
Length=1888
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 80005 ACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGATAGTACATGCCCGTCTTG 80064
||||| | |||||| | || ||| | | ||| ||||| |||||||||||||||||
Sbjct 1299 ACCGTAAACTGAATCGCCTGCGCCGCCGGCTTCGTGCGCAGGTAGTACATGCCCGTCTTC 1358
Query 80065 AGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCC 80124
|||||| |||||||| | | |||||| || ||| |||||| | || || | |
Sbjct 1359 AGGCCCAGTTTCCAGCCAAAGAAGTGCATCGAGGTGATCTTCGCCATGGTCGGCTCGGCA 1418
Query 80125 ATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATTTCA 80184
||| | ||| || ||||| ||||| |||||| ||||| || || || ||||| ||
Sbjct 1419 ATGTGCACGTTGAGCGACTGCGACTGGTCGATGAAGGCCCCGCGGTCGGCGGCCATCTCC 1478
Query 80185 ATAATTGACTTTTGTGGAATTTCCCATACTGT 80216
| ||| | ||| || ||||| ||||| || ||
Sbjct 1479 AGAATCGCCTTCTGCGGAATCTCCCAGACGGT 1510
>seq7596
Length=30452
Score = 100 bits (110), Expect = 3e-16
Identities = 274/414 (66%), Gaps = 22/414 (5%)
Strand=Plus/Plus
Query 24712 TGAAATTCAGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAGGAGACGC 24771
||||| || || ||||| || | || |||| | ||||| || || ||||||| |
Sbjct 25111 TGAAAACCAAGTTCTATCAAGCCAGCACTTCTGAGCTTTTTGGGAAAGTACAGGAGATCC 25170
Query 24772 CACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCG 24831
| ||| |||||||||||||| || || ||| |||||| || ||| |||||| || ||
Sbjct 25171 CCCAGCGAGAGACCACTCCATTCTACCCTCGATCCCCGTACGGAGTCGCAAAGGCGTACG 25230
Query 24832 CGTACTGGATAACCAAGAACTACCGTGAGGC---CCATGGGATATATGCATGCAACGGAA 24888
| |||||||| | || ||||| ||| | || | | | ||| || ||||
Sbjct 25231 CCTACTGGATTGTCGTCAATTACCGCGAGTCATACCCAAGTCTGTTTGCTGTGAATGGAA 25290
Query 24889 TTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCTGAA--TTTGTTACACGAAAGATTAC 24946
| || ||||||||||| || ||| | || | || ||||| || |||| || ||
Sbjct 25291 TCCTATTCAACCATGAATCACCTCGTAGAGG--CGAAACTTTTGTGACCAGAAAAATCAC 25348
Query 24947 TCTTGGT---------ATTGACCATTGGATCAAGACAAGGGCACCTATTGAGCTGGGAAA 24997
| ||| || ||| ||||| || || || | || |||||||| ||
Sbjct 25349 CCGAGGTGTGGCGAAGATCTACC-TTGGA--GAG-CA--GGAATTCATCGAGCTGGGCAA 25402
Query 24998 CCTAGATGCCAAACGTGATTGGGGGCATGCAGCCGACTACGTCGACGCCATGTGGCGCAT 25057
||| || | ||||| || ||||| ||||| |||||||| || ||||||||| ||
Sbjct 25403 CCTCGACTCGAAACGAGACTGGGGCCATGCTCGTGACTACGTTGAAGCCATGTGGATTAT 25462
Query 25058 GCTCCAACAGAATAAGCCAGAGGATTTTGTGATCGGCACCGGTCAGACGCATTC 25111
| | || || | | || || || ||||| || | ||| || | |||||||
Sbjct 25463 GATGCAGCAAGAACACCCGGACGACTTTGTCATTGCCACTGGAGAAGCGCATTC 25516
>seq32170
Length=3971
Score = 84.2 bits (92), Expect = 2e-11
Identities = 173/257 (67%), Gaps = 3/257 (1%)
Strand=Plus/Minus
Query 81175 AGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTC 81234
||| | |||||||||| ||||||||||| |||| || ||| || || ||||
Sbjct 3870 AGGCCGGGGCACTCGTGCGGGCACATCAGCGACCAGACGCCGTCCGCCTGGACGCGCTTC 3811
Query 81235 ATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCA 81294
|| || ||| || | ||| | |||| ||| ||||||||| || ||||||
Sbjct 3810 ATAAAGAGGTCCGGCACCCACATGGCGTAGAAGAGGTCGCGGGCACGGAGCTCCTCCGAG 3751
Query 81295 CCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATAC 81354
|| ||| ||||| |||||||| || | |||||| || ||||| || || || ||
Sbjct 3750 CCGGTGTTCTTGCGCAGGTCGAGAAACTCGAAGATGTCGGCGTGCCACGGTTCGAGGTAG 3691
Query 81355 ACGGCGATCGACCCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTA 81411
| ||| | || |||| ||| | || ||||||| ||||| ||||| || |||
Sbjct 3690 ATGGCAAACGCCCCCGGGCGCTTGTTCCCGCCCTGGTCCACGTAGCGGGCGGTGTTGTTG 3631
Query 81412 AATACACGCAACATAGG 81428
| || |||| ||| ||
Sbjct 3630 TAGACGCGCAGCATCGG 3614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569692539970400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |