Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq49536 104 2e-17 >seq49536 Length=2110 Score = 104 bits (114), Expect = 2e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 29872 CTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTC 29931 ||||||||| |||||| || | ||||| |||||| || || | | |||| |||||||| Sbjct 1865 CTTCAGCGGCCCCACGTGATTCTTGTAGATGTGAGCATCGCCAATGGTGTGCACAAACTC 1924 Query 29932 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29991 |||| | || ||| |||||| || ||||||| || || || ||||||||||| || Sbjct 1925 GCCCGCCTTCAGGCCGCAGACGTGGGCGATCATGTGGGTCAGCAGCGAGTAGCTGGCAAT 1984 Query 29992 GTTAAAGGGTACCCCGAGCCCC 30013 ||| ||||| || || || ||| Sbjct 1985 GTTGAAGGGCACACCCAGGCCC 2006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405881218133640