Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq280 185 8e-42
seq21746 181 9e-41
seq180 163 2e-35
seq322 149 5e-31
seq4530 143 2e-29
seq76387 125 6e-24
seq28390 118 9e-22
>seq280
Length=341618
Score = 185 bits (204), Expect = 8e-42
Identities = 179/230 (78%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| |||| |||||| | || ||||| || || ||||| |||
Sbjct 106707 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCATCC 106648
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||||| || ||| || |||||||||||||| || || ||||| |||||
Sbjct 106647 GATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATTCCACCAGATCAG 106588
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | ||||||||||||||||||||| | ||| | ||||||||||||
Sbjct 106587 CAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTGTCCGATTACAAC 106528
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | ||| ||||| | ||| | || ||||||||
Sbjct 106527 ATCCAAAAGGAGTCTACACTTCATCTGGTTCTTCGTCTACGTGGTGGCAT 106478
Score = 185 bits (204), Expect = 8e-42
Identities = 179/230 (78%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || ||| |||| |||||| | || ||||| || || ||||| |||
Sbjct 114953 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCATCC 114894
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||||| || ||| || |||||||||||||| || || ||||| |||||
Sbjct 114893 GATACTATTGAGAATGTAAAAGCCAAGATTCAAGACAAAGAGGGTATTCCACCAGATCAG 114834
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| |||||||| | ||||||||||||||||||||| | ||| | ||||||||||||
Sbjct 114833 CAACGTTTAATCTTTGCCGGCAAACAATTGGAAGACGGACGCACCTTGTCCGATTACAAC 114774
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | ||| ||||| | ||| | || ||||||||
Sbjct 114773 ATCCAAAAGGAGTCTACACTTCATCTGGTTCTTCGTCTACGTGGTGGCAT 114724
Score = 158 bits (174), Expect = 1e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| ||||| |||| ||||| | || ||||| || || ||||| |||
Sbjct 106251 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCC 106192
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || ||| ||||| ||||| || ||||| || ||||| ||||||
Sbjct 106191 GATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 106132
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||||||||| | ||||||||| || | ||||| | ||| | |||||||| |||
Sbjct 106131 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAAC 106072
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| ||||| ||| | ||||| || ||||| | || ||||| ||
Sbjct 106071 ATACAAAAAGAGTCTACCCTGCATTTAGTCCTGCGTCTCCGTGGTGGTAT 106022
Score = 158 bits (174), Expect = 1e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| ||||| |||| ||||| | || ||||| || || ||||| |||
Sbjct 114497 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCC 114438
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || ||| ||||| ||||| || ||||| || ||||| ||||||
Sbjct 114437 GATACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAA 114378
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||||||||| | ||||||||| || | ||||| | ||| | |||||||| |||
Sbjct 114377 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTGTCCGATTATAAC 114318
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| ||||| ||| | ||||| || ||||| | || ||||| ||
Sbjct 114317 ATACAAAAAGAGTCTACCCTGCATTTAGTCCTGCGTCTCCGTGGTGGTAT 114268
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || |||||||| ||||| | || || | || || || |||||
Sbjct 105111 ATGCAAATTTTCGTCAAGACTCTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCGTCA 105052
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || || ||||||||||| || ||||| ||||||
Sbjct 105051 GACACCATCGAGAACGTTAAGGCCAAGATCCAGGACAAAGAAGGTATCCCACCAGATCAA 104992
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||||||||| | ||||||||| || | ||||| | || | |||||||| |||
Sbjct 104991 CAGCGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTTTGTCCGATTATAAC 104932
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | |||||||| ||||| | || ||||| ||
Sbjct 104931 ATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGTCTTCGCGGTGGTAT 104882
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || || || | || || | || || || |||||
Sbjct 105339 ATGCAAATCTTCGTGAAGACCCTAACTGGTAAAACCATCACCTTGGAGGTTGAGCCGTCA 105280
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || |||||||| ||||||||||| || || ||||||
Sbjct 105279 GACACCATCGAAAACGTCAAGGCCAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 105220
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | |||||| ||||||||||||||| | ||| | || || ||||||
Sbjct 105219 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGCCGCACCTTGTCGGACTACAAC 105160
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | |||||||| ||||| | || ||||| ||
Sbjct 105159 ATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGTCTTCGCGGTGGTAT 105110
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || || || || || | || || | || || || || |||
Sbjct 105795 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCC 105736
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||| || || || ||||| || || || || || |||||
Sbjct 105735 GACACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAG 105676
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||||||||| | ||||||||| ||| | ||||| | ||| | ||||| ||||||
Sbjct 105675 CAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACAAC 105616
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | || |||||| ||||| |||| || || ||
Sbjct 105615 ATCCAAAAGGAGTCTACGCTCCACTTGGTTCTGCGTCTGCGCGGAGGAAT 105566
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || || || || || | || || | || || || || |||
Sbjct 114041 ATGCAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCC 113982
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||| || || || ||||| || || || || || |||||
Sbjct 113981 GACACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAG 113922
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||||||||| | ||||||||| ||| | ||||| | ||| | ||||| ||||||
Sbjct 113921 CAGCGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTGTCCGACTACAAC 113862
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | || |||||| ||||| |||| || || ||
Sbjct 113861 ATCCAAAAGGAGTCTACGCTCCACTTGGTTCTGCGTCTGCGCGGAGGAAT 113812
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||||||| || | || || | || || || |||||
Sbjct 104883 ATGCAGATCTTCGTGAAGACACTGACCGGTAAAACCATCACCTTGGAGGTTGAGCCGTCA 104824
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| ||||| || || || ||||| || || || ||||||
Sbjct 104823 GACACCATCGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGTATTCCTCCAGATCAA 104764
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||||| ||||| ||||||||| | || | ||||| |||||
Sbjct 104763 CAGCGTTTGATTTTTGCCGGTAAACAGTTGGAAGACGGCCGTACTTTGTCCGACTACAAT 104704
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||||| ||||| ||||| | |||||||| | ||| | || || |||
Sbjct 104703 ATTCAGAAGGAATCGACTCTCCATTTGGTGCTTCGTCTTCGCGGAGGC 104656
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || ||||| ||||| |||| || | || || || || |||
Sbjct 105567 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGAGCCATCC 105508
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||||||||| ||||| || || || || ||
Sbjct 105507 GACACCATTGAAAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 105448
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | || || || || | |||||| | ||| | || || ||||||
Sbjct 105447 CAACGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACGGGCGCACCTTGTCGGACTACAAC 105388
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | |||||||| ||||| | || ||||| ||
Sbjct 105387 ATCCAAAAGGAGTCTACCCTCCATTTGGTCCTGCGTCTCCGTGGTGGTAT 105338
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || ||||| |||| || | || || || || ||
Sbjct 106023 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCA 105964
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || ||||| || ||||| || || || |||||
Sbjct 105963 GACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 105904
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | |||||||||||| | ||||| | ||| | || || ||||||
Sbjct 105903 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAAC 105844
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | |||||||| ||||| | || ||||| ||
Sbjct 105843 ATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCGTCTTCGTGGTGGTAT 105794
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || ||||| |||| || | || || || || ||
Sbjct 114269 ATGCAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCA 114210
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || ||||| || ||||| || || || |||||
Sbjct 114209 GACACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 114150
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | |||||||||||| | ||||| | ||| | || || ||||||
Sbjct 114149 CAGCGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCACCTTGTCTGACTACAAC 114090
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | |||||||| ||||| | || ||||| ||
Sbjct 114089 ATCCAAAAGGAGTCTACTCTGCATTTGGTCCTGCGTCTTCGTGGTGGTAT 114040
>seq21746
Length=7614
Score = 181 bits (200), Expect = 9e-41
Identities = 178/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || |||||| | || ||| | || || || || ||
Sbjct 2196 ATGCAGATTTTCGTCAAAACACTTACGGGCAAGACCATCACTTTGGAGGTCGAGCCTTCT 2255
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||||| ||||| |||||||| |||||||| ||||||
Sbjct 2256 GACACTATCGAAAATGTCAAGGCTAAAATCCAAGATAAAGAAGGTATACCACCAGATCAA 2315
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||||| || | ||||||||| ||||||||||| || || | ||||| ||||||
Sbjct 2316 CAACGTTTGATTTTCGCCGGCAAGCAATTGGAAGATGGTCGTACTTTGTCCGACTACAAC 2375
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||||||||| ||| | || ||||| |||||| |||| ||||| ||
Sbjct 2376 ATTCAAAAGGAGTCAACCCTCCACTTGGTGTTGCGTCTGCGTGGTGGTAT 2425
>seq180
Length=417715
Score = 163 bits (180), Expect = 2e-35
Identities = 126/150 (84%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 135503 CGAGAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGG 135562
|| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 107606 CGCGAAGGCAAAATGCACGGATTTCTGCGCATGTATTGGGCGAAAAAGATATTGGAATGG 107665
Query 135563 TCTGCATCGCCTGCAGAGGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTA 135622
||||| | || | | ||| ||| || ||| || ||||||||||| | || ||||||
Sbjct 107666 TCTGCTACACCCGAAATGGCTCTAGAAACCGCCATTCTTTTTAATGATAAATATAGTTTA 107725
Query 135623 GATGGACGCGATTCAAATGGCTACGTAGGT 135652
|||||||| ||| | || ||||||||||||
Sbjct 107726 GATGGACGAGATCCGAACGGCTACGTAGGT 107755
Score = 116 bits (128), Expect = 3e-21
Identities = 114/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 135506 GAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCT 135565
|||||||||||||| || ||| | |||||||| ||||||||||||||| | |||||| |
Sbjct 110334 GAAGGCAAAATGCATGGTTTTCTACGCATGTACTGGGCAAAAAAGATACTTGAATGGGCC 110393
Query 135566 GCATCGCCTGCAGAGGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGAT 135625
|| |||| | | | || || || || || | || ||||| | ||||||||||||
Sbjct 110394 GCTACGCCGGAACAAGCCTTAGAAATTGCTATCTACTTGAATGACAAATACAGTTTAGAT 110453
Query 135626 GGACGCGATTCAAATGGCTACGTAGGT 135652
||||| ||| |||| ||||| ||||||
Sbjct 110454 GGACGGGATCCAAACGGCTATGTAGGT 110480
>seq322
Length=316913
Score = 149 bits (164), Expect = 5e-31
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044
|||||||| || || || || || || || |||||| ||||||||||||| || || ||
Sbjct 56431 GCCATGCAAATTTTCGTTAAGACCCTAACGGGCAAGACTATTACTCTTGAGGTTGAGCCT 56372
Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
|| || | |||||| || || |||||||||||||| ||||| || || || |||
Sbjct 56371 TCGGATACAATTGAGCATGTTAAGGCGAAAATTCAAGACAAGGAAGGGATCCCTCCAGAT 56312
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
|||||||| |||| | ||| || || ||||| ||||| | ||| | ||||||||
Sbjct 56311 CAACAGCGCCTAATTTTCGCAGGAAAGCAATTAGAAGATGGGCGAACCTTAGCCGATTAC 56252
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| ||||||||||| || || |||||||| ||
Sbjct 56251 AATATTCAAAAGGAATCTACTTTACATTTAGT 56220
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044
|||||||| || || || || || || || ||||| ||||||||||||| || || ||
Sbjct 38530 GCCATGCAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCT 38589
Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
|| || | |||||| || || ||||||||||||||| | ||| || || || |||
Sbjct 38590 TCGGATACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGAT 38649
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
|||||||| |||| | ||| || ||||||| |||||| | ||| | ||| ||||
Sbjct 38650 CAACAGCGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTAC 38709
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| ||||||||||| || || |||||||| ||
Sbjct 38710 AATATTCAAAAGGAATCTACTTTACATTTAGT 38741
>seq4530
Length=49833
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044
|||||||| || || || || || || || ||||| ||||||||||||| || || ||
Sbjct 18304 GCCATGCAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCT 18363
Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
|| || | |||||| || || ||||||||||||||| | ||| || || || |||
Sbjct 18364 TCGGATACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGAT 18423
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
|||||||| |||| | ||| || ||||||| |||||| | ||| | ||| ||||
Sbjct 18424 CAACAGCGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTAC 18483
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| ||||||||||| || || |||||||| ||
Sbjct 18484 AATATTCAAAAGGAATCTACTTTACATTTAGT 18515
>seq76387
Length=1185
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||||||| | || ||||| || ||||| || |
Sbjct 415 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGAGCCCAGC 356
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || |||||||| || ||||| || || || ||
Sbjct 355 GACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAG 296
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| ||||| || | || ||| | ||| | || || ||||||
Sbjct 295 CAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACCCTCTCGGACTACAAC 236
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216
|| ||||||||||| ||| | || |||| | ||| |||| || ||||
Sbjct 235 ATCCAAAAGGAGTCCACCCTCCACCTGGTCCTTCGTCTGCGCGGCGGCA 187
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || || ||||||||| | || || || || ||||| ||
Sbjct 989 CATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 930
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| || || || || || ||||| || ||||| || || || ||
Sbjct 929 CGATACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 870
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || | || ||| || ||| | || ||||||||
Sbjct 869 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACCCTCTCGGATTACAA 810
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || |||| | ||| |||| ||||| ||
Sbjct 809 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGCGCGGTGGTAT 759
>seq28390
Length=4902
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || ||||| || || || || |||||| | || || || || || || || ||
Sbjct 307 CATGCAAATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGCCCTC 366
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| |||| |||| || || ||| || || ||||| || ||||| || ||||| ||
Sbjct 367 TGATACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 426
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | |||||| ||||| | || ||| | ||| |||| || |||||
Sbjct 427 GCAGCGTCTCATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 486
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||| | || ||||| | || | || |||||
Sbjct 487 TATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCGACTCCGTGGTGG 534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434447220278400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |