Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_028762.1
Length=161989
Score E
Sequences producing significant alignments: (Bits) Value
seq85787 113 5e-20
seq81708 102 8e-17
>seq85787
Length=1013
Score = 113 bits (124), Expect = 5e-20
Identities = 121/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 55554 TAATAACATCTTCTTTCTGTTCTGCAGTCAGAGAATTAAATCTGACGGCATACCCAGAAA 55613
|||| ||||||| | ||| ||| ||| || || || || | || ||||| |||||||
Sbjct 615 TAATTACATCTTTCTGCTGCTCTTTAGTGAGCGAGTTGAAGCGTACAGCATAGCCAGAAA 674
Query 55614 CGCGAATTGTTAATTGTGGATATTTTTCAGGATGTTCTTTAGCATCTAACAACATTTCTT 55673
|||| || || | || |||||||| || |||||||| | ||||| |||| ||| ||
Sbjct 675 CGCGGATGGTCAGCTGCGGATATTTCTCCGGATGTTCCATGGCATCCAACAGCATCTCAC 734
Query 55674 TATTAAGAACATTGACATTCAGATGTTGTCCACCTTCGAT 55713
||| | || ||||| ||||||||||| |||||||||||
Sbjct 735 GATTCATTACGTTGACGTTCAGATGTTGACCACCTTCGAT 774
>seq81708
Length=1085
Score = 102 bits (112), Expect = 8e-17
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 55538 TCAGTAAATGTTCTGTTAATAACATCTTCTTTCTGTTCTGCAGTCAGAGAATTAAATCTG 55597
|| |||||||| | |||||||||| | ||| |||| ||||| | ||||| |
Sbjct 248 TCGGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGCGCGTTAAAGCGC 307
Query 55598 ACGGCATACCCAGAAACGCGAATTGTTAATTGTGGATATTTTTCAGGATGTTCTTTAGCA 55657
|||||||| || ||||||||||| || || |||||||||||||| ||||| | |||
Sbjct 308 ACGGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGATGGTTCACGGCA 367
Query 55658 TCTAACAACATTTCTTTATTAAGAACATTGACATTCAGATGTTGTCCACCTTCGAT 55713
||| |||| |||| | || || || || ||||| || || |||||||| ||
Sbjct 368 TCTTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGACCACCTTCAAT 423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517675355206800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |