Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq81708 140 4e-28 >seq81708 Length=1085 Score = 140 bits (154), Expect = 4e-28 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 125471 CCGGAAGTTCGCATTGAAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACG 125530 ||| | || || |||||||| |||||||| || || || || || ||| |||||||||| Sbjct 435 CCGCAGGTGCGTATTGAAGGTGGTCAGCACCTGAACGTAAACGTACTGCGTCGTGAAACG 376 Query 125531 CTTCAAGATGCAGTAAAACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGT 125590 | ||||||| || || ||||| ||||||||||| || |||||||||| ||||| || Sbjct 375 TTGGAAGATGCCGTGAACCATCCGGAAAAATATCCACAGTTGACCATTCGCGTTTCCGGC 316 Query 125591 TATGCAGTTCGTTTTAATGCATTGACTCGCGAACAGCAGTTGGACGTTATCAATCGCACG 125650 ||||| || || ||||| || |||| | || |||||| || ||||| | ||| || Sbjct 315 TATGCCGTGCGCTTTAACGCGCTGACGCCAGAGCAGCAGCGTGATGTTATTACTCGTACA 256 Query 125651 TTTACGGAAGCTATGTAATGGC 125672 ||||| ||| |||||| || Sbjct 255 TTTACCGAAAGCCTGTAATTGC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582104678386000