Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq49536 109 4e-19 >seq49536 Length=2110 Score = 109 bits (120), Expect = 4e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTC 29705 ||||||| ||||||| | ||||| ||||||||| || | |||||| |||||||| | Sbjct 1867 TCAGCGGCCCCACGTGATTCTTGTAGATGTGAGCATCGCCAATGGTGTGCACAAACTCGC 1926 Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 ||| | || ||| |||||| || ||||||| || || || ||||||||||| |||| Sbjct 1927 CCGCCTTCAGGCCGCAGACGTGGGCGATCATGTGGGTCAGCAGCGAGTAGCTGGCAATGT 1986 Query 29766 TAAAGGGCACCCCGAGCCCC 29785 | |||||||| || || ||| Sbjct 1987 TGAAGGGCACACCCAGGCCC 2006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405734173619620