Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq49536 113 3e-20 >seq49536 Length=2110 Score = 113 bits (124), Expect = 3e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27138 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 27197 ||||||||| ||||||||| | ||||| |||||| || || | |||||| |||||||| Sbjct 1865 CTTCAGCGGCCCCACGTGATTCTTGTAGATGTGAGCATCGCCAATGGTGTGCACAAACTC 1924 Query 27198 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257 |||| | || ||| |||||| || ||||||| || || || ||||||||||| || Sbjct 1925 GCCCGCCTTCAGGCCGCAGACGTGGGCGATCATGTGGGTCAGCAGCGAGTAGCTGGCAAT 1984 Query 27258 GTTAAAGGGTACCCCGAGCCCC 27279 ||| ||||| || || || ||| Sbjct 1985 GTTGAAGGGCACACCCAGGCCC 2006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369116893008770