Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_030953.1
Length=170650
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 206 3e-48
seq85787 132 5e-26
>seq81708
Length=1085
Score = 206 bits (228), Expect = 3e-48
Identities = 159/189 (84%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 9556 TGCCATTACAAACTCTCGGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTC 9615
||| |||||| || |||||||| ||||||| ||||| || |||||||| || || |||
Sbjct 233 TGCAATTACAGGCTTTCGGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTC 292
Query 9616 AGAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCC 9675
|| | ||||||||| || ||||| ||||| || || ||||||| ||| ||||||||||||
Sbjct 293 AGCGCGTTAAAGCGCACGGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCC 352
Query 9676 GGATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGA 9735
||||| || || |||||||||| |||||||||||||| ||||| ||||||||||| |||
Sbjct 353 GGATGGTTCACGGCATCTTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGA 412
Query 9736 CCACCTTCA 9744
|||||||||
Sbjct 413 CCACCTTCA 421
>seq85787
Length=1013
Score = 132 bits (146), Expect = 5e-26
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 9556 TGCCATTACAAACTCTCGGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTC 9615
||| ||||||| || ||| || ||||| | || || || |||||| || |||
Sbjct 584 TGCGATTACAACGACTGGGTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTG 643
Query 9616 AGAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCC 9675
|| ||||| ||||| || ||||| || || || ||||||||||||||||||||||| |||
Sbjct 644 AGCGAGTTGAAGCGTACAGCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCC 703
Query 9676 GGATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGA 9735
||||| | | ||||| ||| | |||||| || ||||| |||||||| ||||||
Sbjct 704 GGATGTTCCATGGCATCCAACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGA 763
Query 9736 CCACCTTC 9743
||||||||
Sbjct 764 CCACCTTC 771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545360529252000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |