Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_031019.1 Length=41809 Score E Sequences producing significant alignments: (Bits) Value seq77432 80.6 7e-11 >seq77432 Length=1164 Score = 80.6 bits (88), Expect = 7e-11 Identities = 127/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 1984 GCCTGAAAGCGATGGCGAAAGACCTGAAAACTCCAGTTATCTCCCTAAGCCAGCTCTCCC 2043 ||||||| ||| |||| ||||| || ||| ||| | || | || ||||||| | Sbjct 451 GCCTGAAGGCGCTGGCCAAAGAGCTAAAATGTCCGCTAGTCGCGTTATCCCAGCTCAATC 510 Query 2044 GCGATGTTGAGAAGCGGCCAAACAAGCGCCCGACAAACGCAGATTTGCGGGATTCAGGAA 2103 || | ||||| ||| || || ||||| || | |||| |||| |||| ||||| || Sbjct 511 GCCAGGTTGAATCGCGCCCCAATAAGCGGCCAAACAACGGAGATCTGCGTGATTCTGGCG 570 Query 2104 GCATTGAACAGGACGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGACGAGA 2163 | ||||||||||| ||| || || | ||||||| || | ||| ||| |||||| Sbjct 571 CGCTGGAACAGGACGCCGACCTGATTCTCTTCATCTATCGTGATGAGGTTTATAACGAGA 630 Query 2164 AC 2165 || Sbjct 631 AC 632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133529628882340