Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_031020.1
Length=163201
Score E
Sequences producing significant alignments: (Bits) Value
seq85787 149 7e-31
seq81708 149 7e-31
>seq85787
Length=1013
Score = 149 bits (164), Expect = 7e-31
Identities = 136/172 (79%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 52720 GTAAATGTACGAGAAATTACATCACGCTGTTGTTCTTTGGTCAGGGAGTTAAAGCGAACA 52779
|| || ||||| | ||||||||| ||| || ||||| || || ||||| ||||| |||
Sbjct 602 GTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCGAGTTGAAGCGTACA 661
Query 52780 GCATAACCAGAAACACGGATAGTCAACTGTGGGTATTTTGTAGGGTCTTCCATCGCTTCA 52839
||||| |||||||| ||||| |||| ||| || ||||| || | |||||| || ||
Sbjct 662 GCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGATGTTCCATGGCATCC 721
Query 52840 AGCAACATTTCACGATTCATTACGTTAACGTTCAGGTGCTGACCGCCTTCGA 52891
| || ||| ||||||||||||||||| |||||||| || ||||| |||||||
Sbjct 722 AACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCACCTTCGA 773
>seq81708
Length=1085
Score = 149 bits (164), Expect = 7e-31
Identities = 141/180 (78%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 52716 TTCAGTAAATGTACGAGAAATTACATCACGCTGTTGTTCTTTGGTCAGGGAGTTAAAGCG 52775
||| ||||||||||||| ||| ||||||||||| || ||| ||||| | |||||||||
Sbjct 247 TTCGGTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGCGCGTTAAAGCG 306
Query 52776 AACAGCATAACCAGAAACACGGATAGTCAACTGTGGGTATTTTGTAGGGTCTTCCATCGC 52835
|| ||||| || ||||| || || ||||||||||| |||||| || | | || ||
Sbjct 307 CACGGCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGATGGTTCACGGC 366
Query 52836 TTCAAGCAACATTTCACGATTCATTACGTTAACGTTCAGGTGCTGACCGCCTTCGACACG 52895
|| |||| |||||||| || |||||| ||||||||||||||||| ||||| | |||
Sbjct 367 ATCTTCCAACGTTTCACGACGCAGTACGTTTACGTTCAGGTGCTGACCACCTTCAATACG 426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521549553445200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |