Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_031022.1 Length=108050 Score E Sequences producing significant alignments: (Bits) Value seq81708 98.7 7e-16 >seq81708 Length=1085 Score = 98.7 bits (108), Expect = 7e-16 Identities = 128/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 55502 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCGTTAAAACGTACA 55561 |||||||||||| ||||||| || ||| || || | ||||| |||||||| || || Sbjct 251 GTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGCGCGTTAAAGCGCACG 310 Query 55562 GCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC- 55620 || || || ||||| || || || || || || |||||||| ||||| ||| ||||| Sbjct 311 GCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGATGGTTCACGGCATCT 370 Query 55621 -CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTCGAT 55674 | || | | ||||||| | || || || || ||||||||||| || || || Sbjct 371 TCCAACGTT--TCACGACGCAGTACGTTTACGTTCAGGTGCTGACCACCTTCAAT 423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345270108778570