Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_031047.1
Length=170770
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 159 4e-34
seq85787 100 3e-16
>seq81708
Length=1085
Score = 159 bits (176), Expect = 4e-34
Identities = 130/158 (82%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 62569 CTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACC 62628
|||||||||||||| |||||||||| || || ||||||||||||||||| ||| |||||
Sbjct 390 CTGCGTCGTGAAACGTTGGAAGATGCCGTGAACCATCCGGAAAAATATCCACAGTTGACC 331
Query 62629 ATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGAC 62688
|| || || ||||| ||||| || ||||||||| | ||||| || || |||||||| ||
Sbjct 330 ATTCGCGTTTCCGGCTATGCCGTGCGCTTTAACGCGCTGACGCCAGAGCAGCAGCGTGAT 271
Query 62689 GTTATCGCTCGTACCTTCACCGAGAGTTTGTAATGGCA 62726
||||| ||||||| || ||||| || |||||| |||
Sbjct 270 GTTATTACTCGTACATTTACCGAAAGCCTGTAATTGCA 233
>seq85787
Length=1013
Score = 100 bits (110), Expect = 3e-16
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 62574 TCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCG 62633
|||||| | ||| ||||| | | |||||||| |||||||||||||||||||||||
Sbjct 736 TCGTGAGATGCTGTTGGATGCCATGGAACATCCGGAGAAATATCCGCAGCTGACCATCCG 677
Query 62634 TGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGACGTTAT 62693
|| || || ||||| || ||||| ||||| || ||| || |||||| || || ||
Sbjct 676 CGTTTCTGGCTATGCTGTACGCTTCAACTCGCTCACTAAAGAGCAGCAGAAAGATGTAAT 617
Query 62694 CGCTCGTACCTTCACCGAGAGTTTGTAATGGCA 62726
| ||||| |||||| || ||||||| |||
Sbjct 616 TACACGTACTTTCACCCAGTCGTTGTAATCGCA 584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545744113236000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |