Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_031095.1
Length=168758
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 159 4e-34
seq85787 111 2e-19
>seq81708
Length=1085
Score = 159 bits (176), Expect = 4e-34
Identities = 141/176 (80%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 47302 ATTGAAGGCGGTCAGCACCTGAACGTTAACGTGTTGCGTCGCGAAACCTTGCTGGATGCG 47361
|||||||| ||||||||||||||||| ||||| ||||||| ||||| ||| |||||
Sbjct 423 ATTGAAGGTGGTCAGCACCTGAACGTAAACGTACTGCGTCGTGAAACGTTGGAAGATGCC 364
Query 47362 GTTGAGCACCCAGAAAAATACCCGCAGCTGACTATTCGCGTTTCCGGATACGCGGTGCGC 47421
|| | || || |||||||| || ||| |||| |||||||||||||| || || ||||||
Sbjct 363 GTGAACCATCCGGAAAAATATCCACAGTTGACCATTCGCGTTTCCGGCTATGCCGTGCGC 304
Query 47422 TTCAACTCCTTGACACCAGAACAGCAGCGCGACGTTATCGCTCGTACTTTCACAGA 47477
|| ||| | |||| ||||| |||||||| || ||||| ||||||| || || ||
Sbjct 303 TTTAACGCGCTGACGCCAGAGCAGCAGCGTGATGTTATTACTCGTACATTTACCGA 248
>seq85787
Length=1013
Score = 111 bits (122), Expect = 2e-19
Identities = 130/176 (74%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 47299 AAAATTGAAGGCGGTCAGCACCTGAACGTTAACGTGTTGCGTCGCGAAACCTTGCTGGAT 47358
|| || ||||| ||||| || |||||||| ||||| || ||| || | || |||||
Sbjct 777 AACATCGAAGGTGGTCAACATCTGAACGTCAACGTAATGAATCGTGAGATGCTGTTGGAT 718
Query 47359 GCGGTTGAGCACCCAGAAAAATACCCGCAGCTGACTATTCGCGTTTCCGGATACGCGGTG 47418
|| | || || || || ||||| ||||||||||| || |||||||| || || || ||
Sbjct 717 GCCATGGAACATCCGGAGAAATATCCGCAGCTGACCATCCGCGTTTCTGGCTATGCTGTA 658
Query 47419 CGCTTCAACTCCTTGACACCAGAACAGCAGCGCGACGTTATCGCTCGTACTTTCAC 47474
||||||||||| | || ||| |||||| || || || | |||||||||||
Sbjct 657 CGCTTCAACTCGCTCACTAAAGAGCAGCAGAAAGATGTAATTACACGTACTTTCAC 602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539312688437600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |