Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq81517 91.5 1e-13 >seq81517 Length=1088 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 70376 CTTCCACCATGTCATACACTATTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAG 70435 || || || |||||| ||| ||||| || || | | ||||| |||| ||||| ||| Sbjct 695 CTACCTCCTTGTCATTGTCTAGCACAATTTTTCGTTGCAAATGGTGAGCTGTCTTGTCAG 636 Query 70436 CTATATCAACGTAGTGCTGACATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCC 70495 | ||||||||||| |||||||| | | || |||||||||||||| || || ||||| Sbjct 635 TTGTATCAACGTAGCGCTGACATGGGATTGGGCGTGCCATTCAATATCGCCTCTTATGCT 576 Query 70496 TTACTTACACATCTTATTGC 70515 || | ||| || | ||||| Sbjct 575 TTGTTAACATATATGATTGC 556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335219935907290