Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_031933.1
Length=114180
Score E
Sequences producing significant alignments: (Bits) Value
seq81708 120 2e-22
seq85787 114 9e-21
>seq81708
Length=1085
Score = 120 bits (132), Expect = 2e-22
Identities = 131/172 (76%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 28005 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAATGCGTTAAATCGAACA 28064
|||||||||||| ||||||| || ||| || || |||||| |||||||| || ||
Sbjct 251 GTAAATGTACGAGTAATAACATCACGCTGCTGCTCTGGCGTCAGCGCGTTAAAGCGCACG 310
Query 28065 GCATAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGCGCATC- 28123
|||||||| || || || ||||||||||| ||||||||||| ||||| ||| |||||
Sbjct 311 GCATAGCCGGAAACGCGAATGGTCAACTGTGGATATTTTTCCGGATGGTTCACGGCATCT 370
Query 28124 -CAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCACCCTC 28174
| || | | ||||| | | || || || || |||||||||||||| ||
Sbjct 371 TCCAACGTT--TCACGACGCAGTACGTTTACGTTCAGGTGCTGACCACCTTC 420
>seq85787
Length=1013
Score = 114 bits (126), Expect = 9e-21
Identities = 137/186 (74%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 27991 ATTATATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAATG 28050
|||| | || ||| || || ||||| |||| || || ||||| || || || | |
Sbjct 588 ATTACAACGACTGGGTGAAAGTACGTGTAATTACATCTTTCTGCTGCTCTTTAGTGAGCG 647
Query 28051 CGTTAAATCGAACAGCATAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGAT 28110
||| || || |||||||||||||| || |||||||||| ||| |||||||| || ||||
Sbjct 648 AGTTGAAGCGTACAGCATAGCCAGAAACGCGGATGGTCAGCTGCGGATATTTCTCCGGAT 707
Query 28111 GTTTCTGCGCATCCAAAAGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACCAC 28170
||| | |||||||| ||| ||||| | | || ||||| || || || |||||||
Sbjct 708 GTTCCATGGCATCCAACAGCATCTCACGATTCATTACGTTGACGTTCAGATGTTGACCAC 767
Query 28171 CCTCGA 28176
| ||||
Sbjct 768 CTTCGA 773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 364865388581670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |