Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq77432 89.7 1e-13 >seq77432 Length=1164 Score = 89.7 bits (98), Expect = 1e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 35049 GCCTGAAAGCGATGGCGAAAGACCTGAAAACTCCAGTTATCTCATTAAGCCAGCTCTCCC 35108 ||||||| ||| |||| ||||| || ||| ||| | || | ||| ||||||| | Sbjct 451 GCCTGAAGGCGCTGGCCAAAGAGCTAAAATGTCCGCTAGTCGCGTTATCCCAGCTCAATC 510 Query 35109 GCGATGTTGAGAAGCGGCCAAACAAGCGCCCGACAAACGCAGATTTGCGTGATTCAGGAA 35168 || | ||||| ||| || || ||||| || | |||| |||| |||||||||| || Sbjct 511 GCCAGGTTGAATCGCGCCCCAATAAGCGGCCAAACAACGGAGATCTGCGTGATTCTGGCG 570 Query 35169 GCATTGAACAGGACGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGACGAGA 35228 | ||||||||||| ||| || || | ||||||| || | ||| ||| |||||| Sbjct 571 CGCTGGAACAGGACGCCGACCTGATTCTCTTCATCTATCGTGATGAGGTTTATAACGAGA 630 Query 35229 AC 35230 || Sbjct 631 AC 632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129162927748700