Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq280 174 4e-38
seq28390 150 4e-31
seq76387 145 2e-29
seq2574 143 6e-29
seq322 102 2e-16
seq4530 89.7 1e-12
>seq280
Length=341618
Score = 174 bits (192), Expect = 4e-38
Identities = 159/201 (79%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||||| || || ||||| |||||| | ||||| || ||||||
Sbjct 105108 CAAATTTTCGTCAAGACTCTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCGTCAGAC 105049
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| |||||||||||||| ||||| || || || ||
Sbjct 105048 ACCATCGAGAACGTTAAGGCCAAGATCCAGGACAAAGAAGGTATCCCACCAGATCAACAG 104989
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || |||||||||||||| | ||| | ||||||||||| ||
Sbjct 104988 CGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTTTGTCCGATTATAACATC 104929
Query 178104 CAAAAAGAATCAACACTGCAT 178124
||||| || || || || |||
Sbjct 104928 CAAAAGGAGTCTACCCTCCAT 104908
Score = 141 bits (156), Expect = 2e-28
Identities = 154/202 (76%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || ||||| |||||| | ||||| || ||||||
Sbjct 106020 CAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCAGAC 105961
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || ||| ||||| || || || ||||| || || || || |||||
Sbjct 105960 ACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAGCAG 105901
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||||||||| |||||||| |||||||| | || |||| | || || ||| |
Sbjct 105900 CGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCAC-CTTGTCTGACTACAACAT 105842
Query 178103 CCAAAAAGAATCAACACTGCAT 178124
|||||| || || || ||||||
Sbjct 105841 CCAAAAGGAGTCTACTCTGCAT 105820
Score = 141 bits (156), Expect = 2e-28
Identities = 154/202 (76%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || ||||| |||||| | ||||| || ||||||
Sbjct 114266 CAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCAGAC 114207
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || ||| ||||| || || || ||||| || || || || |||||
Sbjct 114206 ACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAGCAG 114147
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||||||||| |||||||| |||||||| | || |||| | || || ||| |
Sbjct 114146 CGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCAC-CTTGTCTGACTACAACAT 114088
Query 178103 CCAAAAAGAATCAACACTGCAT 178124
|||||| || || || ||||||
Sbjct 114087 CCAAAAGGAGTCTACTCTGCAT 114066
Score = 136 bits (150), Expect = 9e-27
Identities = 153/202 (76%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || ||||| |||||| | ||||| || ||||||
Sbjct 105336 CAAATCTTCGTGAAGACCCTAACTGGTAAAACCATCACCTTGGAGGTTGAGCCGTCAGAC 105277
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||| || |||||||| || ||||| || || |||
Sbjct 105276 ACCATCGAAAACGTCAAGGCCAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAACAA 105217
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || |||||||| ||||| | ||||| || | || |||| | || || ||| |
Sbjct 105216 CGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGCCGCAC-CTTGTCGGACTACAACAT 105158
Query 178103 CCAAAAAGAATCAACACTGCAT 178124
|||||| || || || || |||
Sbjct 105157 CCAAAAGGAGTCTACCCTCCAT 105136
Score = 136 bits (150), Expect = 9e-27
Identities = 158/209 (76%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || || || ||||| ||||| | ||||| || || |||
Sbjct 105792 CAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCCGAC 105733
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||||||| ||||| |||||||| || || || ||||| || |||||
Sbjct 105732 ACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAG 105673
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||||||||| || || ||||||||||| | || |||| |||| || ||| |
Sbjct 105672 CGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCAC-CTTGTCCGACTACAACAT 105614
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTT 178131
|||||| || || || || || |||| ||
Sbjct 105613 CCAAAAGGAGTCTACGCTCCA-CTTGGTT 105586
Score = 136 bits (150), Expect = 9e-27
Identities = 158/209 (76%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || || || ||||| ||||| | ||||| || || |||
Sbjct 114038 CAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCCGAC 113979
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||||||| ||||| |||||||| || || || ||||| || |||||
Sbjct 113978 ACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAG 113919
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||||||||| || || ||||||||||| | || |||| |||| || ||| |
Sbjct 113918 CGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCAC-CTTGTCCGACTACAACAT 113860
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTT 178131
|||||| || || || || || |||| ||
Sbjct 113859 CCAAAAGGAGTCTACGCTCCA-CTTGGTT 113832
Score = 132 bits (146), Expect = 1e-25
Identities = 152/202 (75%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || ||||| || ||| | ||||| || || |||
Sbjct 105564 CAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGAGCCATCCGAC 105505
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||| ||||| ||||| || ||||| |||||||||
Sbjct 105504 ACCATTGAAAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAA 105445
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || || ||||||||||| || | || |||| | || || ||| |
Sbjct 105444 CGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACGGGCGCAC-CTTGTCGGACTACAACAT 105386
Query 178103 CCAAAAAGAATCAACACTGCAT 178124
|||||| || || || || |||
Sbjct 105385 CCAAAAGGAGTCTACCCTCCAT 105364
Score = 132 bits (146), Expect = 1e-25
Identities = 152/202 (75%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| | || || ||||| ||||| || ||||| ||| || ||
Sbjct 106248 CAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCCGAT 106189
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| || || || || || ||||| ||||| || || || ||
Sbjct 106188 ACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAACAG 106129
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||||||||| || |||||||||||||| | || |||| ||||||||||| |
Sbjct 106128 CGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCAC-CTTGTCCGATTATAACAT 106070
Query 178103 CCAAAAAGAATCAACACTGCAT 178124
|||||||| || || ||||||
Sbjct 106069 ACAAAAAGAGTCTACCCTGCAT 106048
Score = 132 bits (146), Expect = 1e-25
Identities = 152/202 (75%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| | || || ||||| ||||| || ||||| ||| || ||
Sbjct 114494 CAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCCGAT 114435
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| || || || || || ||||| ||||| || || || ||
Sbjct 114434 ACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAACAG 114375
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||||||||| || |||||||||||||| | || |||| ||||||||||| |
Sbjct 114374 CGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCAC-CTTGTCCGATTATAACAT 114316
Query 178103 CCAAAAAGAATCAACACTGCAT 178124
|||||||| || || ||||||
Sbjct 114315 ACAAAAAGAGTCTACCCTGCAT 114294
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| |||||| | || || ||||| ||||| | ||||| || || ||
Sbjct 106476 CAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCCGAT 106417
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| |||||| || |||||||| || ||||||||||| || || || |||
Sbjct 106416 ACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAACAA 106357
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || ||| | || |||||| | || | | || || || |
Sbjct 106356 CGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAATATT 106297
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || ||||| ||| ||||| | ||||||
Sbjct 106296 CAGAAGGAATCTACATTGCATTTAGTTTTG 106267
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| |||||| | || || ||||| ||||| | ||||| || || ||
Sbjct 114722 CAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCCGAT 114663
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| |||||| || |||||||| || ||||||||||| || || || |||
Sbjct 114662 ACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAACAA 114603
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || ||| | || |||||| | || | | || || || |
Sbjct 114602 CGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAATATT 114543
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || ||||| ||| ||||| | ||||||
Sbjct 114542 CAGAAGGAATCTACATTGCATTTAGTTTTG 114513
Score = 118 bits (130), Expect = 3e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || ||||| || ||| | ||||| || || |||
Sbjct 113810 CAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGAGCCATCCGAC 113751
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||| ||||| ||||| || ||||| |||||||||
Sbjct 113750 ACCATTGAAAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAA 113691
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| | || || || || || ||||||||||| ||
Sbjct 113690 CGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACGG 113656
Score = 111 bits (122), Expect = 4e-19
Identities = 145/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || ||||| |||||| | ||||| || ||||||
Sbjct 104880 CAGATCTTCGTGAAGACACTGACCGGTAAAACCATCACCTTGGAGGTTGAGCCGTCAGAC 104821
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || ||| || || ||||| || ||||| || ||||| || || ||
Sbjct 104820 ACCATCGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGTATTCCTCCAGATCAACAG 104761
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || ||||| |||||| | ||||| || | ||| | |||| || || |
Sbjct 104760 CGTTTGATTTTTGCCGGTAAACAGTTGGAAGACGGCCGTACTTTGTCCGACTACAATATT 104701
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || ||||| || || |||
Sbjct 104700 CAGAAGGAATCGACTCTCCAT 104680
>seq28390
Length=4902
Score = 150 bits (166), Expect = 4e-31
Identities = 157/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| || ||||| || || || |||||||||||||| || ||| ||
Sbjct 311 CAAATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGCCCTCTGAT 370
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| || || |||||| |||||||| || || |||||||| ||||||||
Sbjct 371 ACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAG 430
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| ||||||||||| || || | || ||| | || || || ||
Sbjct 431 CGTCTCATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACCCTTTCGGACTACAATATC 490
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 491 CAGAAGGAGTCGACCCTCCA-CTTG 514
>seq76387
Length=1185
Score = 145 bits (160), Expect = 2e-29
Identities = 158/208 (76%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || ||||| || || || ||||||||||||||||| || |||
Sbjct 985 CAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGA--GCCCAGCG 928
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
| ||||||||||| || || ||||| |||||||| || || ||||| ||||||||||
Sbjct 927 ATACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGC 868
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || |||||||| ||||| |||||||| || || | || || | ||||| |||
Sbjct 867 AGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACCCTCTCGGATTACAACA 808
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || || ||
Sbjct 807 TCCAGAAGGAGTCCACCCTTCACCTGGT 780
Score = 131 bits (144), Expect = 4e-25
Identities = 155/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || ||||| || || |||||||| ||||||||||| || |||
Sbjct 412 CAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGA--GCCCAGCG 355
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| || || ||||| || ||||| || || || || ||||||||||
Sbjct 354 ACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAGC 295
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || |||||||| || || |||||||| || || | || || | || || |||
Sbjct 294 AGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACCCTCTCGGACTACAACA 235
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
||||||| || || || || || || ||
Sbjct 234 TCCAAAAGGAGTCCACCCTCCACCTGGT 207
Score = 120 bits (132), Expect = 7e-22
Identities = 140/187 (75%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || ||||| || || |||||||| ||||||||||| || |||
Sbjct 757 CAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGA--GCCCAGCG 700
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| || || ||||| || ||||| || || || || ||||||||||
Sbjct 699 ACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAGC 640
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || |||||||| || || || ||||| || || | || || ||| || |||
Sbjct 639 AGCGTCTCATCTTCGCTGGCAAGCAACTCGAGGACGGTCGCACCCTCAGCGACTACAACA 580
Query 178102 TCCAAAA 178108
|||||||
Sbjct 579 TCCAAAA 573
>seq2574
Length=80092
Score = 143 bits (158), Expect = 6e-29
Identities = 145/187 (78%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || ||||| || || || ||||||||||||||||| || |||
Sbjct 59046 CAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGA--GCCCAGCG 58989
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| || || ||||| |||||||| || || ||||| || |||||||
Sbjct 58988 ACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGC 58929
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| ||||| ||||||||||| || |||||||| || || | || || ||| || |||
Sbjct 58928 AGCGACTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACGCTGAGCGACTACAACA 58869
Query 178102 TCCAAAA 178108
|||| ||
Sbjct 58868 TCCAGAA 58862
>seq322
Length=316913
Score = 102 bits (112), Expect = 2e-16
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || || || || ||||| || || ||
Sbjct 56425 CAAATTTTCGTTAAGACCCTAACGGGCAAGACTATTACTCTTGAGGTTGAGCCTTCGGAT 56366
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||| | || || || ||||| ||||| ||||| |||||||| || || ||
Sbjct 56365 ACAATTGAGCATGTTAAGGCGAAAATTCAAGACAAGGAAGGGATCCCTCCAGATCAACAG 56306
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| ||||| || | |||||||| | || | |||||||| || |
Sbjct 56305 CGCCTAATTTTCGCAGGAAAGCAATTAGAAGATGGGCGAACCTTAGCCGATTACAATATT 56246
Query 178104 CAAAAAGAATCAAC 178117
||||| ||||| ||
Sbjct 56245 CAAAAGGAATCTAC 56232
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || | || || || || || ||||| || || ||
Sbjct 38536 CAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCTTCGGAT 38595
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||| | || || ||| ||||| ||||| | ||| ||||| || || || ||
Sbjct 38596 ACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGATCAACAG 38655
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| |||||||| |||||||| | || | |||| ||| || |
Sbjct 38656 CGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTACAATATT 38715
Query 178104 CAAAAAGAATCAAC 178117
||||| ||||| ||
Sbjct 38716 CAAAAGGAATCTAC 38729
>seq4530
Length=49833
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || | || || || || || ||||| || || ||
Sbjct 18310 CAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCTTCGGAT 18369
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||| | || || ||| ||||| ||||| | ||| ||||| || || || ||
Sbjct 18370 ACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGATCAACAG 18429
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| |||||||| |||||||| | || | |||| ||| || |
Sbjct 18430 CGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTACAATATT 18489
Query 178104 CAAAAAGAATCAAC 178117
||||| ||||| ||
Sbjct 18490 CAAAAGGAATCTAC 18503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202394505403980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |