Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq280 174 4e-38 seq28390 150 4e-31 seq76387 145 2e-29 seq2574 143 6e-29 seq322 102 2e-16 seq4530 89.7 1e-12 >seq280 Length=341618 Score = 174 bits (192), Expect = 4e-38 Identities = 159/201 (79%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||||| || || ||||| |||||| | ||||| || |||||| Sbjct 105108 CAAATTTTCGTCAAGACTCTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCGTCAGAC 105049 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| || ||||| |||||||||||||| ||||| || || || || Sbjct 105048 ACCATCGAGAACGTTAAGGCCAAGATCCAGGACAAAGAAGGTATCCCACCAGATCAACAG 104989 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || |||||||||||||| | ||| | ||||||||||| || Sbjct 104988 CGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTTTGTCCGATTATAACATC 104929 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || || ||| Sbjct 104928 CAAAAGGAGTCTACCCTCCAT 104908 Score = 141 bits (156), Expect = 2e-28 Identities = 154/202 (76%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || || ||||| |||||| | ||||| || |||||| Sbjct 106020 CAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCAGAC 105961 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || ||| ||||| || || || ||||| || || || || ||||| Sbjct 105960 ACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAGCAG 105901 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| |||||||| |||||||| | || |||| | || || ||| | Sbjct 105900 CGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCAC-CTTGTCTGACTACAACAT 105842 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 |||||| || || || |||||| Sbjct 105841 CCAAAAGGAGTCTACTCTGCAT 105820 Score = 141 bits (156), Expect = 2e-28 Identities = 154/202 (76%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || || ||||| |||||| | ||||| || |||||| Sbjct 114266 CAAATCTTCGTGAAGACCCTAACTGGCAAAACTATCACCTTGGAGGTTGAGCCATCAGAC 114207 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || ||| ||||| || || || ||||| || || || || ||||| Sbjct 114206 ACCATCGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAGCAG 114147 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| |||||||| |||||||| | || |||| | || || ||| | Sbjct 114146 CGTTTGATCTTCGCCGGCAAACAGCTTGAAGATGGCCGCAC-CTTGTCTGACTACAACAT 114088 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 |||||| || || || |||||| Sbjct 114087 CCAAAAGGAGTCTACTCTGCAT 114066 Score = 136 bits (150), Expect = 9e-27 Identities = 153/202 (76%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || || ||||| |||||| | ||||| || |||||| Sbjct 105336 CAAATCTTCGTGAAGACCCTAACTGGTAAAACCATCACCTTGGAGGTTGAGCCGTCAGAC 105277 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| || |||||||| || ||||| || || ||| Sbjct 105276 ACCATCGAAAACGTCAAGGCCAAGATTCAAGATAAAGAAGGCATTCCTCCAGATCAACAA 105217 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || |||||||| ||||| | ||||| || | || |||| | || || ||| | Sbjct 105216 CGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGCCGCAC-CTTGTCGGACTACAACAT 105158 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 |||||| || || || || ||| Sbjct 105157 CCAAAAGGAGTCTACCCTCCAT 105136 Score = 136 bits (150), Expect = 9e-27 Identities = 158/209 (76%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || || || || ||||| ||||| | ||||| || || ||| Sbjct 105792 CAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCCGAC 105733 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||||||| ||||| |||||||| || || || ||||| || ||||| Sbjct 105732 ACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAG 105673 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| || || ||||||||||| | || |||| |||| || ||| | Sbjct 105672 CGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCAC-CTTGTCCGACTACAACAT 105614 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTT 178131 |||||| || || || || || |||| || Sbjct 105613 CCAAAAGGAGTCTACGCTCCA-CTTGGTT 105586 Score = 136 bits (150), Expect = 9e-27 Identities = 158/209 (76%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || || || || ||||| ||||| | ||||| || || ||| Sbjct 114038 CAGATATTTGTGAAGACCCTAACTGGTAAAACCATCACGTTGGAGGTTGAGCCATCCGAC 113979 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||||||| ||||| |||||||| || || || ||||| || ||||| Sbjct 113978 ACCATTGAGAACGTCAAAGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAG 113919 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| || || ||||||||||| | || |||| |||| || ||| | Sbjct 113918 CGTTTAATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCAC-CTTGTCCGACTACAACAT 113860 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTT 178131 |||||| || || || || || |||| || Sbjct 113859 CCAAAAGGAGTCTACGCTCCA-CTTGGTT 113832 Score = 132 bits (146), Expect = 1e-25 Identities = 152/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || || ||||| || ||| | ||||| || || ||| Sbjct 105564 CAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGAGCCATCCGAC 105505 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||| ||||| ||||| || ||||| ||||||||| Sbjct 105504 ACCATTGAAAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAA 105445 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||||||||||| || | || |||| | || || ||| | Sbjct 105444 CGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACGGGCGCAC-CTTGTCGGACTACAACAT 105386 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 |||||| || || || || ||| Sbjct 105385 CCAAAAGGAGTCTACCCTCCAT 105364 Score = 132 bits (146), Expect = 1e-25 Identities = 152/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| | || || ||||| ||||| || ||||| ||| || || Sbjct 106248 CAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCCGAT 106189 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || || || || || ||||| ||||| || || || || Sbjct 106188 ACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAACAG 106129 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| || |||||||||||||| | || |||| ||||||||||| | Sbjct 106128 CGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCAC-CTTGTCCGATTATAACAT 106070 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 |||||||| || || |||||| Sbjct 106069 ACAAAAAGAGTCTACCCTGCAT 106048 Score = 132 bits (146), Expect = 1e-25 Identities = 152/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| | || || ||||| ||||| || ||||| ||| || || Sbjct 114494 CAAATATTTGTTAAAACATTGACTGGCAAAACCATCACTCTGGAGGTTGAACCTTCCGAT 114435 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || || || || || ||||| ||||| || || || || Sbjct 114434 ACTATCGAAAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATCCCACCAGATCAACAG 114375 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| || |||||||||||||| | || |||| ||||||||||| | Sbjct 114374 CGTTTAATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCAC-CTTGTCCGATTATAACAT 114316 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 |||||||| || || |||||| Sbjct 114315 ACAAAAAGAGTCTACCCTGCAT 114294 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| |||||| | || || ||||| ||||| | ||||| || || || Sbjct 106476 CAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCCGAT 106417 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| |||||| || |||||||| || ||||||||||| || || || ||| Sbjct 106416 ACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAACAA 106357 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || || ||| | || |||||| | || | | || || || | Sbjct 106356 CGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAATATT 106297 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || ||||| ||| ||||| | |||||| Sbjct 106296 CAGAAGGAATCTACATTGCATTTAGTTTTG 106267 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| |||||| | || || ||||| ||||| | ||||| || || || Sbjct 114722 CAGATTTTCGTCAAAACTTTGACGGGTAAAACCATCACTTTGGAGGTTGAGCCTTCCGAT 114663 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| |||||| || |||||||| || ||||||||||| || || || ||| Sbjct 114662 ACCATTGAGAATGTCAAAGCTAAAATTCAGGATAAGGAAGGAATCCCACCAGATCAACAA 114603 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || || ||| | || |||||| | || | | || || || | Sbjct 114602 CGTTTAATTTTCGCTGGCAAGCAGTTGGAGGATGGACGCACATTGTCTGACTACAATATT 114543 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || ||||| ||| ||||| | |||||| Sbjct 114542 CAGAAGGAATCTACATTGCATTTAGTTTTG 114513 Score = 118 bits (130), Expect = 3e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || || ||||| || ||| | ||||| || || ||| Sbjct 113810 CAAATCTTCGTGAAGACCCTGACTGGCAAAACTATAACCTTGGAGGTTGAGCCATCCGAC 113751 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||| ||||| ||||| || ||||| ||||||||| Sbjct 113750 ACCATTGAAAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAA 113691 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || | || || || || || ||||||||||| || Sbjct 113690 CGTTTGATTTTTGCTGGTAAGCAGCTCGAAGACGG 113656 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || ||||| |||||| | ||||| || |||||| Sbjct 104880 CAGATCTTCGTGAAGACACTGACCGGTAAAACCATCACCTTGGAGGTTGAGCCGTCAGAC 104821 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || ||| || || ||||| || ||||| || ||||| || || || Sbjct 104820 ACCATCGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGTATTCCTCCAGATCAACAG 104761 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || ||||| |||||| | ||||| || | ||| | |||| || || | Sbjct 104760 CGTTTGATTTTTGCCGGTAAACAGTTGGAAGACGGCCGTACTTTGTCCGACTACAATATT 104701 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 104700 CAGAAGGAATCGACTCTCCAT 104680 >seq28390 Length=4902 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || ||||| || || || |||||||||||||| || ||| || Sbjct 311 CAAATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGCCCTCTGAT 370 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || || |||||| |||||||| || || |||||||| |||||||| Sbjct 371 ACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAG 430 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| ||||||||||| || || | || ||| | || || || || Sbjct 431 CGTCTCATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACCCTTTCGGACTACAATATC 490 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 491 CAGAAGGAGTCGACCCTCCA-CTTG 514 >seq76387 Length=1185 Score = 145 bits (160), Expect = 2e-29 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || ||||| || || || ||||||||||||||||| || ||| Sbjct 985 CAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGA--GCCCAGCG 928 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | ||||||||||| || || ||||| |||||||| || || ||||| |||||||||| Sbjct 927 ATACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGC 868 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| ||||| |||||||| || || | || || | ||||| ||| Sbjct 867 AGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGTCGCACCCTCTCGGATTACAACA 808 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 807 TCCAGAAGGAGTCCACCCTTCACCTGGT 780 Score = 131 bits (144), Expect = 4e-25 Identities = 155/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || ||||| || || |||||||| ||||||||||| || ||| Sbjct 412 CAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGA--GCCCAGCG 355 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| || || ||||| || ||||| || || || || |||||||||| Sbjct 354 ACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAGC 295 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| || || |||||||| || || | || || | || || ||| Sbjct 294 AGCGTCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACCCTCTCGGACTACAACA 235 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||||| || || || || || || || Sbjct 234 TCCAAAAGGAGTCCACCCTCCACCTGGT 207 Score = 120 bits (132), Expect = 7e-22 Identities = 140/187 (75%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || ||||| || || |||||||| ||||||||||| || ||| Sbjct 757 CAGATCTTCGTTAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTGGA--GCCCAGCG 700 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| || || ||||| || ||||| || || || || |||||||||| Sbjct 699 ACACCATTGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAGC 640 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| || || || ||||| || || | || || ||| || ||| Sbjct 639 AGCGTCTCATCTTCGCTGGCAAGCAACTCGAGGACGGTCGCACCCTCAGCGACTACAACA 580 Query 178102 TCCAAAA 178108 ||||||| Sbjct 579 TCCAAAA 573 >seq2574 Length=80092 Score = 143 bits (158), Expect = 6e-29 Identities = 145/187 (78%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || ||||| || || || ||||||||||||||||| || ||| Sbjct 59046 CAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGA--GCCCAGCG 58989 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| || || ||||| |||||||| || || ||||| || ||||||| Sbjct 58988 ACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGC 58929 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | ||||| ||||||||||| || |||||||| || || | || || ||| || ||| Sbjct 58928 AGCGACTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACGCTGAGCGACTACAACA 58869 Query 178102 TCCAAAA 178108 |||| || Sbjct 58868 TCCAGAA 58862 >seq322 Length=316913 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || || || || || || ||||| || || || Sbjct 56425 CAAATTTTCGTTAAGACCCTAACGGGCAAGACTATTACTCTTGAGGTTGAGCCTTCGGAT 56366 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||| | || || || ||||| ||||| ||||| |||||||| || || || Sbjct 56365 ACAATTGAGCATGTTAAGGCGAAAATTCAAGACAAGGAAGGGATCCCTCCAGATCAACAG 56306 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| ||||| || | |||||||| | || | |||||||| || | Sbjct 56305 CGCCTAATTTTCGCAGGAAAGCAATTAGAAGATGGGCGAACCTTAGCCGATTACAATATT 56246 Query 178104 CAAAAAGAATCAAC 178117 ||||| ||||| || Sbjct 56245 CAAAAGGAATCTAC 56232 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || | || || || || || ||||| || || || Sbjct 38536 CAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCTTCGGAT 38595 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||| | || || ||| ||||| ||||| | ||| ||||| || || || || Sbjct 38596 ACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGATCAACAG 38655 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| |||||||| |||||||| | || | |||| ||| || | Sbjct 38656 CGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTACAATATT 38715 Query 178104 CAAAAAGAATCAAC 178117 ||||| ||||| || Sbjct 38716 CAAAAGGAATCTAC 38729 >seq4530 Length=49833 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || | || || || || || ||||| || || || Sbjct 18310 CAAATTTTCGTTAAGACCCTAACGCGCAAGACTATTACTCTTGAGGTTGAGCCTTCGGAT 18369 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||| | || || ||| ||||| ||||| | ||| ||||| || || || || Sbjct 18370 ACAATTGAGCATGTGAAGGCAAAAATTCAAGACAAGGGAGGGATCCCCCCAGATCAACAG 18429 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| |||||||| |||||||| | || | |||| ||| || | Sbjct 18430 CGCCTAATTTTCGCAGGAAAACAATAGGAAGATGGGCGAACCTTAGCCGGTTACAATATT 18489 Query 178104 CAAAAAGAATCAAC 178117 ||||| ||||| || Sbjct 18490 CAAAAGGAATCTAC 18503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202394505403980