Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq76387 181 1e-40 seq2574 132 4e-26 seq280 129 5e-25 seq21746 93.3 4e-14 seq322 82.4 7e-11 >seq76387 Length=1185 Score = 181 bits (200), Expect = 1e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| ||||| | ||||| || || ||| |||||| || ||||| ||||| || Sbjct 188 GCCGCCGCGCAGACGAAGGACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCCGA 247 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||||| |||| |||||||||||||| ||||| ||||| ||||| ||||||| ||| Sbjct 248 GAGGGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 307 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 || || ||||||||| ||| || ||||| | | |||||||| | |||||| Sbjct 308 AATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCAC 367 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || ||||| || || || || ||||| ||||| |||||||| Sbjct 368 CTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 415 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||||| || || ||| ||||||||| ||||| || || ||| Sbjct 762 CCACCGCGCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 821 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||||||||| || ||||| || || ||||| ||||||| ||| Sbjct 822 AGGGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 881 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||||| | | || ||||| | ||||||| Sbjct 882 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTATCGCTGGGCTCCACC 941 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || || || || || || || ||||| || || ||||||||| Sbjct 942 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 989 >seq2574 Length=80092 Score = 132 bits (146), Expect = 4e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| || || || |||| |||||||||||||||||||| | Sbjct 58860 CCTTCTGGATGTTGTAGTCGCTCAGCGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 58919 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||| ||||| ||||| | || | || |||||||||| ||| || ||||| | Sbjct 58920 TCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCT 58979 Query 41793 ACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 | |||||||| | ||||||||| | || || || || ||||| || ||||| |||| Sbjct 58980 CGATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 59039 Query 41853 AAATCTGCATGTT 41865 | |||||||| || Sbjct 59040 AGATCTGCATCTT 59052 >seq280 Length=341618 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || ||||| |||||| || ||||| |||||||| Sbjct 105569 CCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGAC 105628 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||| |||||||||||||| || | ||||| || || | ||| Sbjct 105629 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGGA 105688 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | || |||| ||| | | |||||| | ||| || Sbjct 105689 ATACCCTCCTTGTCC-TGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAAC 105747 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| || |||||||| || || ||||| || || |||||||| Sbjct 105748 CTCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 105795 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || ||||| |||||| || ||||| |||||||| Sbjct 113815 CCTCCGCGCAGACGCAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGAC 113874 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||| |||||||||||||| || | ||||| || || | ||| Sbjct 113875 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGAGGA 113934 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | || |||| ||| | | |||||| | ||| || Sbjct 113935 ATACCCTCCTTGTCC-TGGATCTTAGCTTTGACGTTCTCAATGGTGTCGGATGGCTCAAC 113993 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| || |||||||| || || ||||| || || |||||||| Sbjct 113994 CTCCAACGTGATGGTTTTACCAGTTAGGGTCTTCACAAATATCTGCAT 114041 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| ||||| | ||||| ||| || || ||||||||||| || ||||||| Sbjct 104655 CGCCTCCGCGAAGACGAAGCACCAAATGGAGAGTCGATTCCTTCTGAATATTGTAGTCGG 104714 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | | || || |||| || | ||| || ||||| || |||| |||||||| || | | Sbjct 104715 ACAAAGTACGGCCGTCTTCCAACTGTTTACCGGCAAAAATCAAACGCTGTTGATCTGGAG 104774 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 ||| | ||||| ||| || |||| |||| ||| | | ||||| || ||| Sbjct 104775 GAATACCTTCCTTATCC-TGGATTTTGGCTTTAACATTTTCGATGGTGTCTGACGGCTCA 104833 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || |||||||| ||||| ||||| ||||| |||||||| Sbjct 104834 ACCTCCAAGGTGATGGTTTTACCGGTCAGTGTCTTCACGAAGATCTGCAT 104883 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| ||| || || |||||| || |||||||| ||||| Sbjct 104885 CCACCGCGAAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTATAATCGGAC 104944 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || |||||||||||||||||||| || | |||||||| || | || Sbjct 104945 AAAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGG 105004 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814 | | || |||||| || | || || | |||| | | ||||| || ||| || Sbjct 105005 ATACCTTCTTTGTCC-TGGATCTTGGCCTTAACGTTCTCGATGGTGTCTGACGGCTCAAC 105063 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || ||||| || ||||| ||||| |||||||| ||||| Sbjct 105064 CTCCAAGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAAATTTGCAT 105111 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| || || |||||| || ||||| ||||| || Sbjct 105341 CCACCACGGAGACGCAGGACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAC 105400 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||||| |||| ||||||||||| || || || |||| || || ||||| | ||| Sbjct 105401 AAGGTGCGCCCGTCTTCGAGCTGCTTACCAGCAAAAATCAAACGTTGCTGGTCTGGAGGA 105460 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||| | ||| | || || | ||| | | |||||| | ||| || Sbjct 105461 ATACCTTCCTTGT-CTTGAATCTTGGCCTTGACGTTTTCAATGGTGTCGGATGGCTCAAC 105519 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 105520 CTCCAAGGTTATAGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 105567 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| |||||| || |||||| || ||||| ||||| || Sbjct 105797 CCACCACGAAGACGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 105856 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || ||||| ||||||||||| |||| ||||| || || | |||| Sbjct 105857 AAGGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 105916 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| | | || | || |||| ||| | | ||||| | ||| || Sbjct 105917 ATACCTTCCTTAT-CTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCTCAAC 105975 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || ||||| || || || ||||| ||||| || ||||| Sbjct 105976 CTCCAAGGTGATAGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCAT 106023 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| |||||| || |||||| || ||||| ||||| || Sbjct 114043 CCACCACGAAGACGCAGGACCAAATGCAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 114102 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || ||||| ||||||||||| |||| ||||| || || | |||| Sbjct 114103 AAGGTGCGGCCATCTTCAAGCTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 114162 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| | | || | || |||| ||| | | ||||| | ||| || Sbjct 114163 ATACCTTCCTTAT-CTTGGATCTTGGCTTTAACATTTTCGATGGTGTCTGATGGCTCAAC 114221 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || ||||| || || || ||||| ||||| || ||||| Sbjct 114222 CTCCAAGGTGATAGTTTTGCCAGTTAGGGTCTTCACGAAGATTTGCAT 114269 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || ||||| || || || | ||||| || ||||||||||| || ||||| || Sbjct 106253 CCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGAC 106312 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || | ||||||||| ||||| || | || ||||| || | || Sbjct 106313 AATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGG 106372 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCAC 41814 | | ||||| ||| ||| |||| |||| || | | || ||| | ||| || Sbjct 106373 ATTCCTTCCTTATCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAAC 106431 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || ||||||||||||| || || ||||||||||||||| Sbjct 106432 CTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCATG 106480 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || ||||| || || || | ||||| || ||||||||||| || ||||| || Sbjct 114499 CCTCCACGTAGGCGCAAAACTAAATGCAATGTAGATTCCTTCTGAATATTGTAGTCAGAC 114558 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || | ||||||||| ||||| || | || ||||| || | || Sbjct 114559 AATGTGCGTCCATCCTCCAACTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGTGGG 114618 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCAC 41814 | | ||||| ||| ||| |||| |||| || | | || ||| | ||| || Sbjct 114619 ATTCCTTCCTTATCC-TGAATTTTAGCTTTGACATTCTCAATGGTATCGGAAGGCTCAAC 114677 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || ||||||||||||| || || ||||||||||||||| Sbjct 114678 CTCCAAAGTGATGGTTTTACCCGTCAAAGTTTTGACGAAAATCTGCATG 114726 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || | |||||| || ||| || || |||||||| ||||| Sbjct 106025 CCACCACGGAGACGCAGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGAC 106084 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || |||||||||||||||||||| || | |||||||| || | || Sbjct 106085 AAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGG 106144 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| | | || |||| |||| || | | ||| ||| | || || Sbjct 106145 ATACCTTCCTTAT-CTTGGATTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAAC 106203 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || ||||| || |||| || || || || || ||||| Sbjct 106204 CTCCAGAGTGATGGTTTTGCCAGTCAATGTTTTAACAAATATTTGCAT 106251 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || | |||||| || ||| || || |||||||| ||||| Sbjct 114271 CCACCACGGAGACGCAGGACTAAATGCAGGGTAGACTCTTTTTGTATGTTATAATCGGAC 114330 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || |||||||||||||||||||| || | |||||||| || | || Sbjct 114331 AAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATTAAACGCTGTTGATCTGGTGGG 114390 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| | | || |||| |||| || | | ||| ||| | || || Sbjct 114391 ATACCTTCCTTAT-CTTGGATTTTGGCTTTCACATTTTCGATAGTATCGGAAGGTTCAAC 114449 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || ||||| || |||| || || || || || ||||| Sbjct 114450 CTCCAGAGTGATGGTTTTGCCAGTCAATGTTTTAACAAATATTTGCAT 114497 >seq21746 Length=7614 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || || |||||| |||||||| |||||||| Sbjct 2422 CCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCGGAC 2363 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || | |||||||||||||| |||| || ||||| || | || Sbjct 2362 AAAGTACGACCATCTTCCAATTGCTTGCCGGCGAAAATCAAACGTTGTTGATCTGGTGGT 2303 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | || || || |||||| ||| || || | |||||| | ||| | Sbjct 2302 ATACCTTCTTTATCTTGGATTTTAGCCTTGACATTTTCG--ATAGTGTCAGAAGGCTCGA 2245 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||| || || || || ||||| || || || |||||||||||||| || Sbjct 2244 CCTCCAAAGTGATGGTCTTGCCCGTAAGTGTTTTGACGAAAATCTGCATTTT 2193 >seq322 Length=316913 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||| ||||| || || |||| | ||| ||| | || || | ||||| || ||||| Sbjct 56238 TCCTTTTGAATATTGTAATCGGCTAAGGTTCGCCCATCTTCTAATTGCTTTCCTGCGAAA 56297 Query 41732 ATCAGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || ||||||||||| || | |||| | || ||||||| | ||| |||| || | ||| | Sbjct 56298 ATTAGGCGCTGTTGATCTGGAGGGATCCCT-TCCTTGT-CTTGAATTTTCGCCTTAAC-A 56354 Query 41791 CGACACA---GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTT 41847 | | || || || | ||| ||||| | || || || || ||||| || ||||| Sbjct 56355 TG-CTCAATTGTATCCGAAGGCTCAACCTCAAGAGTAATAGTCTTGCCCGTTAGGGTCTT 56413 Query 41848 TACGAAAATCTGCATG 41863 |||||||| |||||| Sbjct 56414 AACGAAAATTTGCATG 56429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461803151404000