Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq115183 120 4e-22 >seq115183 Length=152922 Score = 120 bits (132), Expect = 4e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || || | ||||| ||||||| || ||||||||| || ||||||||||| ||||| Sbjct 137566 TGCGCCATCATGTGAGTCAGCAAGGCGTAGCTGGCGATATTGAAGGGCACGCCCAGGAAA 137625 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 || || | ||||||||| |||||||| || |||| ||| | ||||| || |||||| Sbjct 137626 ATATCGGCACTGCGCTGGTAGAGCTGGCAAGATAGCTTGCCGTCTGCCACATAAAACTGG 137685 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGC 145937 ||||| |||||| || ||||||||||| | || ||||| ||||||||| Sbjct 137686 AACAGGGCGTGGCATGGGGGCAGGGCCATCTGGCCCACATCCGCTACGTTCCAGGC 137741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588637868219360