Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq54774 102 2e-17 >seq54774 Length=16914 Score = 102 bits (112), Expect = 2e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 354 TTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCT 413 ||||| ||||| ||| |||||| |||||| |||||||||||||||||||||||||||| Sbjct 12036 TTATTAGTGGGCCGTATAGGATTTGAACCTATGACCAACGGATTAAAAGTCCGCTGCTCT 11977 Query 414 ACCGACTGAGCTAACGACCCA 434 ||| ||||||||||| |||| Sbjct 11976 ACCAGCTGAGCTAACGGCCCA 11956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100470706847760