Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_003324.1 Length=57416 Score E Sequences producing significant alignments: (Bits) Value seq121570 80.6 1e-10 >seq121570 Length=2833 Score = 80.6 bits (88), Expect = 1e-10 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 44200 ACACATCCTTGATGTCGTCGGCGATGGTCTTCTTTTCTTCCTCCAAGCGTTCGATGCGGT 44259 |||||||||||||||||||||||| | |||||| |||||||| | ||||||||| || | Sbjct 1380 ACACATCCTTGATGTCGTCGGCGAAGCCCTTCTTCTCTTCCTCAAGGCGTTCGATCCGCT 1321 Query 44260 GGATGAA 44266 |||||| Sbjct 1320 CGATGAA 1314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183184245869424