Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq9079 91.5 1e-13 >seq9079 Length=83715 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || || || ||||| |||||||| || || |||| |||||| || ||| Sbjct 2676 TGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAGACAGGGTGCGGCCGTCTTCTAGCTGT 2735 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || || ||| |||| |||||||||||||| || || || ||||| ||||| |||||| Sbjct 2736 TTGCCCGCAAAGATAAGACGTTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGGATTTTT 2795 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | ||| | ||||| | || || ||||| | || | || || ||||| Sbjct 2796 GCCTTGACATTTTCAATGGTGTCACTAGGCTCGACTTCGAGCGTGATGGTTTTACCGGTG 2855 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 | ||| || || || || ||||| Sbjct 2856 AGTGTCTTGACAAAAATCTGCAT 2878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505778020034880