Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq81145 86.0 1e-11 seq70155 86.0 1e-11 >seq81145 Length=12080 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 273274 TCGGAGTGGGGAGACTCGAACTCCCGACATCCTGCTCCCAAAGCAGGCGCGCTACCA-AC 273332 |||| || | | || | |||| ||||||||||||||||||||||||||||||||||| || Sbjct 10685 TCGGGGTAGAGGGATTTGAACCCCCGACATCCTGCTCCCAAAGCAGGCGCGCTACCAGAC 10626 Query 273333 TGCGCTACACTCCG 273346 ||||||| || ||| Sbjct 10625 TGCGCTATACCCCG 10612 >seq70155 Length=1439 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 273274 TCGGAGTGGGGAGACTCGAACTCCCGACATCCTGCTCCCAAAGCAGGCGCGCTACCA-AC 273332 |||| || | | || | |||| ||||||||||||||||||||||||||||||||||| || Sbjct 525 TCGGGGTAGAGGGATTTGAACCCCCGACATCCTGCTCCCAAAGCAGGCGCGCTACCAGAC 584 Query 273333 TGCGCTACACTCCG 273346 ||||||| || ||| Sbjct 585 TGCGCTATACCCCG 598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894753565012160