Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq115180 93.3 1e-14 >seq115180 Length=148627 Score = 93.3 bits (102), Expect = 1e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 36582 CGTGACTTCCGCTGGCACGATCTGCGCCACACCTGGGCGAGCTGGCACGTGCAGCGCGGC 36641 || |||| ||||| ||||| |||| ||| ||||||||||||||||| || ||| ||| Sbjct 11649 CGGGACTGCCGCTTTCACGACCTGCACCATACCTGGGCGAGCTGGCATGTTCAGAATGGC 11708 Query 36642 ACGCCGCTACAGGTGCTCAAGGAACTGGGCGGGTGGGAAACCATGGAGATGGTGCAACGG 36701 || || || | | || || || ||||| ||||| || |||| |||||| | | Sbjct 11709 ACCCCACTCTTTATATTGAAAGAGCTAGGCGGCTGGGAGACTTTGGACATGGTGAAGAAG 11768 Query 36702 TATGCTCACCTGTCGGCTGGGCATCTGGCGCAGT 36735 ||||| |||||| || || |||||||| |||| Sbjct 11769 TATGCCCACCTGGACGCAGGCCATCTGGCACAGT 11802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123623346379376