Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq121393 84.2 5e-12 >seq121393 Length=7038 Score = 84.2 bits (92), Expect = 5e-12 Identities = 126/177 (71%), Gaps = 4/177 (2%) Strand=Plus/Plus Query 37818 TGATCGCGGAAGTGATCGACCGCGAGGGCGGCTACGTCAACCATCCAGCGGATCGCGGCG 37877 |||| | || ||||||| |||||||||||||||| ||| ||||| || || || |||| Sbjct 2335 TGATTGACGAGGTGATCGGCCGCGAGGGCGGCTACAGCAATCATCCGGCCGACCGTGGCG 2394 Query 37878 GGCCTACGAATTGGGGCATCACTATCGCAGTGGCTCGCCGCCACGGTTACACCGGCGATA 37937 | | ||| ||||| || || ||||| ||| |||| || ||||||||| Sbjct 2395 GCGCGACGCGCTGGGGGATAACCGAGAAGGTGGCGCGCGCGAACGGCTATGCCGGCGATA 2454 Query 37938 TGCGCGCCCTGTCACGTCAGCAAGCGGCAGCGATCTAC--GCGGCTGACTACTGGCA 37992 |||| | ||||| || || ||||| ||||||||| ||||| ||| ||||| Sbjct 2455 TGCGGGTGCTGTCGCGCGAGACGGCGGCGGCGATCTACCGCCGGCT--CTATTGGCA 2509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125171750981256