Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_010355.1 Length=62337 Score E Sequences producing significant alignments: (Bits) Value seq121743 82.4 3e-11 >seq121743 Length=24773 Score = 82.4 bits (90), Expect = 3e-11 Identities = 110/151 (73%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 6469 TTCGTCGAAAGAATAGAACGACTTGAGGAGGAAAAGA--GCGGTCTCCAGGAGGACATCA 6526 ||| |||| | || || || || |||||||| |||| ||| || | ||| || ||| Sbjct 21619 TTCATCGAGCGCATCGAGCGGCTGGAGGAGGAGAAGAAGGCGTTCGC--GGACGATATCC 21676 Query 6527 AGGAAGTCTACTCGGAAGCCAAGGGCACCGGGTTCGACGTCAAGATCATTCGGCAGATCA 6586 || |||||| | ||||||||| ||||| ||||||| ||||| || || |||| Sbjct 21677 GTGACGTCTACACCGAAGCCAAGTCGACCGGCTTCGACGGCAAGACGATCCGCGCGATCG 21736 Query 6587 TCCGCTTGCGGAAGATGGACAAGGCCGACCG 6617 |||| ||||||||||||| ||| || ||| Sbjct 21737 TCCGGCTGCGGAAGATGGAGAAGCACGCCCG 21767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198879619621752