Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq122305 82.4 9e-11 seq122287 82.4 9e-11 >seq122305 Length=34235 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 31214 TCGGGGTGATAGGATTCGAACCTACGGCATCCGCCTCCCAAAGACGGCGCTCTACCAAGC 31273 |||||| || ||||||||||||| |||| | ||||||| ||| | | ||||||||| || Sbjct 30080 TCGGGGAGAGAGGATTCGAACCTCCGGCCCCTGCCTCCCGAAGGCAGTGCTCTACCAGGC 30139 Query 31274 TGAGCTACACCCCGA 31288 |||||||| |||||| Sbjct 30140 TGAGCTACTCCCCGA 30154 >seq122287 Length=26108 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 31214 TCGGGGTGATAGGATTCGAACCTACGGCATCCGCCTCCCAAAGACGGCGCTCTACCAAGC 31273 |||||| || ||||||||||||| |||| | ||||||| ||| | | ||||||||| || Sbjct 22918 TCGGGGAGAGAGGATTCGAACCTCCGGCCCCTGCCTCCCGAAGGCAGTGCTCTACCAGGC 22977 Query 31274 TGAGCTACACCCCGA 31288 |||||||| |||||| Sbjct 22978 TGAGCTACTCCCCGA 22992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620607717568960