Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq14957 145 6e-29 seq82194 140 2e-27 seq118618 136 3e-26 seq45273 129 4e-24 seq184460 109 4e-18 seq46837 109 4e-18 seq40474 96.9 3e-14 seq114166 86.0 5e-11 >seq14957 Length=29832 Score = 145 bits (160), Expect = 6e-29 Identities = 689/1070 (64%), Gaps = 36/1070 (3%) Strand=Plus/Plus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || || |||||||||| || || |||||||| ||||| || |||||||| | || ||| Sbjct 10279 ATGCCGTTGGCATCCATGTCGAAGGTGACTTCTATTTGTGGAACCCCTCTTGGTGCTGGT 10338 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | || ||||| |||| || ||| ||||| |||| |||||| Sbjct 10339 GGAATGCCGTTGAGGTTGAATGTCCCCAACAGATGATTGTCTTTGGTGAGAGCACGTTCA 10398 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || ||| ||| |||||| || ||| ||| ||| || || || || || || || |||| Sbjct 10399 CCTTCGTAAACTTGGATGGTGACTGCAGGTTGGTTGTCGGAGTATGTGGTGAACG-TCTG 10457 Query 517454 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 || | || || || || || ||| | || | ||| |||||| | || || || Sbjct 10458 CGAAGTCTTGCATGGGATGCGTGAGTTGCGCTCCACAATGCGGGTCATGACCCCGCCCGC 10517 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 517572 || || | || | || || || | |||||||| || | || || ||| | || Sbjct 10518 CGTCTCGATGCCTAACGACAGCGGCGCCACATCAACCAGTAGAACATCACGAATGCTGTC 10577 Query 517573 A-TC-AGTTT--GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 || | | | | ||||| | || ||||||| ||||| || || ||||| || | Sbjct 10578 GCTCGAATCTCCGCTCAACACG----GCAGCTTGAACCGCAGCGCCGTAGGCAACGGCCT 10633 Query 517629 CATCAGGATTAACAGTTTCATTTAG--TTTTTTACCATTGAAAAAAT--TTGAAAGAAGT 517684 | || || || | ||| || || ||| || ||||| |||| |||| | || Sbjct 10634 CGTCCGGGTTGATGCC--CATGGAGAGTTCTTTGCCGTTGAAGAAATCCTTGA--GCAGC 10689 Query 517685 TGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 | ||| || || || || |||| || || || || | ||| | || || | ||| || Sbjct 10690 T-TCTGGACTTTTGGGATTCGAGTGGAACCGCCCACGAGTACTACGTCGTGAATCTGCGA 10748 Query 517744 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTA-AACA 517802 ||||||| || | || | || || || || || | | |||| |||| Sbjct 10749 CTTATCCATCTTGGCGTCGCGAAGTGCTCGCTCCACTGGCTCCA-ATGTGCTCCGGAACA 10807 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCT 517861 ||| || || |||||||| | |||| ||| | | || || || || | ||| Sbjct 10808 GGTCCATGCAGAGCTCTTCGAACCTGGCTCGAGTGATCTT-ACTGTAGAAGTCCACGCCT 10866 Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921 ||||||| | || | ||||| | | | | ||| || |||| | || || Sbjct 10867 TCGAACAGTGCGTCGATCTCAATGCTCGCCTCGGCAGAACTCGACAGTGTCCTCTTGGCG 10926 Query 517922 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTA 517981 || ||||| || || | |||||||| | |||| | |||| | || | | ||| Sbjct 10927 CGCTCACAGGCAGTGCGGAGTCTTCGCACGGCTCGAG--GATTCACTCTGAGGTCTTTGC 10984 Query 517982 --TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCTTC 518037 | ||| |||||||| || | ||| | || | || | || || ||||| ||||| Sbjct 10985 GGTGTTTCCTCTTGAATTCCTGCACAAAG--TGCTCCACCATTCGGTTGTCAAAGTCTTC 11042 Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAG 518094 |||||| | | || | |||| ||| | | |||| ||| | || || || | Sbjct 11043 ACCTCCGAGATGTGTGTCACCTGCCGTGGAGCGCACTTCGAACATGGAGCCTTCGTCGAT 11102 Query 518095 AGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 518154 | || | | ||||| ||| |||||||| | ||| || || || || ||| | || Sbjct 11103 GGTCAGCACCGAAACATCGAAGGTGCCACCACCGAGATCGAAGATGAGGACGTTCTTCTC 11162 Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 | | |||| ||||| || ||||| |||| || || ||||| ||||| || || || Sbjct 11163 TCCGCGCAGGTTCTTATCGAGGCCATAGGCAAGCGCGGCTGCAGTAGGTTCGTTGATGAT 11222 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 | || || || |||||||| || || |||||||| || || || || || ||||| Sbjct 11223 GCGCAGCACGTTGAGACCAGCGATAGCGCCGGCATCTTTCGTCGCCTGCCTCTGAGAATC 11282 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCA 518323 ||| || || || || || || ||||| || || | | ||||||| ||| Sbjct 11283 GTTGAAGTAAGCGGGCACCGTGATAACAGCGTCGCTCACCTTCTTTCCCA 11332 >seq82194 Length=16608 Score = 140 bits (154), Expect = 2e-27 Identities = 161/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || ||||| | ||||| || ||||||||||| || |||||||||||||| | |||| Sbjct 10194 TTCTTATCCATTCCATAGGCCAAAGCAGCAGCGGTAGGTTCATTAATAATACGTTTAACA 10135 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||||||| |||||| | |||||||||||||| ||||| | ||| ||||| ||||| || Sbjct 10134 TTAAGACCCGCAATTTTACCTGCATCTTTAGTCGCTTGACGTTGGGAATCATTAAAGTAA 10075 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 || || || || || || ||||| |||| | || | |||| | | |||||| | Sbjct 10074 GCTGGTACTGTGATTACTGCATCCGTTAAGGGATGGCCTAAATAATCTTCTACCGTTTTT 10015 Query 518345 TTCATTTTACTTAAAATCATTGA--TGAAATTTGT 518377 |||||||| |||| | |||| ||||||||| Sbjct 10014 TTCATTTTCATTAAGA--CTTGAGCGGAAATTTGT 9982 Score = 109 bits (120), Expect = 4e-18 Identities = 265/400 (66%), Gaps = 16/400 (4%) Strand=Plus/Minus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 |||| |||||| || | |||| ||||||||| || ||||| | |||||| || ||| Sbjct 11121 GTTGCTTTATCTTTCGCCGAAACATGAAGAATACCGTTAGCATCAATATCAAAAGTAACT 11062 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363 |||||||| || || || | | | || ||||| || || || | ||| ||| || Sbjct 11061 TCAATTTGTGGTACACCACGCGGTGCTGGTGGAATATCTGTTAAGTCAAAACGTCCAAGC 11002 Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423 ||||| || || | | || || || | |||| || | ||||| ||||| Sbjct 11001 GATTTATTCGCTGAAGCCATCTCGCGCTCTCCTTGTAAAACATGAACTGTAACAGCAGTT 10942 Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTGGATT--TTTTACAAGGAATTGTTGTGTTTC 517481 ||||||| | | |||| ||||| | |||| || || ||||| || ||| Sbjct 10941 TGATTATTTTCAGCCGTTGAAAATA--TTTGATTAGCCTTCGTTGGGATTGTGGTATTTT 10884 Query 517482 TATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGA 517541 ||||||| | |||||||||| || ||| ||||| | || ||||| || || |||| Sbjct 10883 TATCAATTAATTTGGTCATAACGCCCCCTAAAGTTTCAATTCCTAGAGAGAGTGGCGTGA 10824 Query 517542 CATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTT 517601 |||||| || | || || || | | || | | |||| | ||| ||| Sbjct 10823 CATCAAGTAACAAAACATCTT-----------TTACTTCGCCGGACAA-TACAGCACCTT 10776 Query 517602 GAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAAC 517641 ||||||| |||||| || |||||||| || |||||||| Sbjct 10775 GAATAGCCGCACCAATAGCCACAGCTTCGTCCGGATTAAC 10736 >seq118618 Length=1519 Score = 136 bits (150), Expect = 3e-26 Identities = 184/253 (73%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 518102 AGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT 518161 |||| || ||| ||| |||||||||| || || | | | ||| | ||| || Sbjct 1519 AGAGAGACGTCAAAGGTGCCACCACCCAAGTCGAAGACCAAGATGTTCTTCTCTCCCTCC 1460 Query 518162 TGGTTTTTATCAAGACCATACGCAAAA-GCAGCAGCAGTTGGTTCATTAATAATTCTCAA 518220 | ||||| ||||||||||| |||| ||||||||||| |||||||| ||||| |||| Sbjct 1459 T--TTTTTGTCAAGACCATATGCAATTCGCAGCAGCAGTAGGTTCATTGATAATCCTCAT 1402 Query 518221 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT-CGTTAA 518279 ||||| ||||| || || |||| ||||| || ||||| || | ||| | || |||| | Sbjct 1401 CACATTGAGACCTGCGATGGTTCCAGCATCCTTGGTGGCCTGGCGTTGGGCATCCGTTGA 1342 Query 518280 AATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCG 518339 |||| || ||||| || | || |||| |||||||| || |||| ||||| || | Sbjct 1341 AATAGGCTGGAACTGTCACGACAGCATGAGTTACTTTCTTTCCAAGGTAAGCCTCCGCAG 1282 Query 518340 TTTGTTTCATTTT 518352 ||| |||||||| Sbjct 1281 TTTCCTTCATTTT 1269 >seq45273 Length=11515 Score = 129 bits (142), Expect = 4e-24 Identities = 684/1070 (64%), Gaps = 36/1070 (3%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || |||||||| |||| || || ||||||||||| || || |||||||| |||| ||| Sbjct 4155 ATGCCATTGGCGTCCATGTCGAAGGTGACTTCAATCTGTGGAACCCCTCTGGGAGCTGGT 4096 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | || ||||| |||| || || ||||| |||| |||||| Sbjct 4095 GGAATGCCGTTAAGGTTGAATGTCCCCAACAGATGGTTGTCTTTGGTGAGAGCACGTTCA 4036 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || ||| ||| |||||| || ||| ||| ||| || || || || || || || |||| Sbjct 4035 CCTTCGTAAACTTGGATGGTGACTGCAGGTTGGTTGTCGGAGTATGTGGTGAACG-TCTG 3977 Query 517454 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 || |||| || || || | ||| | || | ||| |||||| | || || || Sbjct 3976 CGAAGTTTTGCATGGGATGCGCGAGTTGCGCTCCACAATGCGGGTCATGACCCCGCCCGC 3917 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 517572 || |||| || | || || || | || ||||| || | || | | | | || Sbjct 3916 CGTCTCTATGCCTAACGACAGCGGCGCCACGTCAACCAGTAGAACGTCACGGATGCTGTC 3857 Query 517573 A--TCAGTTT--GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 | | | | | ||||| | || ||||||| ||||| || |||||||| |||| Sbjct 3856 GCTTGAATCTCCGCTCAACACG----GCAGCTTGAACCGCAGCGCCGTATGCAACGGCTT 3801 Query 517629 CATCAGGATTAACAGTTTCATTTA--GTTTTTTACCATTGAAAAAAT--TTGAAAGAAGT 517684 | || ||||| | ||| | ||| ||| || ||||| || | |||| | || Sbjct 3800 CGTCTGGATTGATGCC--CATGGAAAGTTCTTTGCCGTTGAAGAACTCCTTGA--GCAGC 3745 Query 517685 TGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 | ||| ||||| || || | | || || || || | ||| | || || | ||| || Sbjct 3744 T-TCTGCACCTTGGGGATTCTTGTAGAACCGCCCACGAGTACGACGTCGTGGATCTGCGA 3686 Query 517744 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT-CTAAACA 517802 ||| |||| || | ||| | | || || || || | | ||| | |||| Sbjct 3685 TTTGTCCATCTTGGCATCGCGAAGTGCCCGCTCCACAGGCTCCA-ATGTGCTGCGGAACA 3627 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCT 517861 ||| || || || ||||| | |||| ||| | || | || || || | ||| Sbjct 3626 GGTCCATGCAGAGCTCCTCGAACCTGGCTCGAGTGATCTTG-CTGTAGAAGTCGACGCCT 3568 Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921 ||||||| | || | || || | | | | |||| || |||| | || || Sbjct 3567 TCGAACAGCGCGTCGATCTCGATGCTCGCCTCGGCCGAACTCGAGAGTGTCCTCTTGGCG 3508 Query 517922 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTA 517981 || ||||| || || | |||||||| | |||| | | || | || | | ||| Sbjct 3507 CGCTCACAGGCAGTGCGGAGTCTTCGCACGGCTCGAG--GGTTCACTCTGAGGTCTTTGC 3450 Query 517982 --TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCTTC 518037 | | | |||||||| || | ||| | || | || | || || ||||||||||| Sbjct 3449 GGTGTATCCTCTTGAATTCCTGCACAAAG--TGCTCCACCATTCGGTTGTCAAAATCTTC 3392 Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAG 518094 ||||| | | || | |||| ||| | | |||| ||| | || || || | Sbjct 3391 TCCTCCGAGATGTGTGTCACCTGCCGTGGAGCGCACTTCGAACATGGAGCCTTCGTCGAT 3332 Query 518095 AGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 518154 | || | | ||||| ||| || || || | ||| ||||| || || ||| | || Sbjct 3331 GGTCAGCACGGAGACATCGAAGGTGCCTCCGCCGAGATCGAAAATGAGGACGTTCTTCTC 3272 Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 | || |||| ||||| || ||||| |||| || || ||||| |||||||| || || Sbjct 3271 TCCGTGCAGGTTCTTATCGAGGCCATAGGCAAGCGCGGCTGCAGTAGGTTCATTGATGAT 3212 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 | || || || |||||||| || || |||||||| || || || || || ||||| Sbjct 3211 GCGCAGCACGTTGAGACCAGCGATAGCGCCGGCATCTTTCGTCGCCTGCCTCTGAGAATC 3152 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCA 518323 ||| || || || || || || || || || || | | ||||||| ||| Sbjct 3151 GTTGAAGTAAGCGGGCACCGTGATMACAGCGTCGCTCACCTTCTTTCCCA 3102 >seq184460 Length=11861 Score = 109 bits (120), Expect = 4e-18 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 517270 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 517329 ||| || |||||||| |||| || || ||||||||||| || || |||||||| |||| Sbjct 7815 AAGGATGCCATTGGCGTCCATGTCGAAGGTGACTTCAATCTGTGGAACCCCTCTGGGAGC 7874 Query 517330 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 517389 ||||| || || | | || |||||||||||| | || ||||| |||| || Sbjct 7875 TGGTGGAATGCCGTTGAGGTTGAATGTTCCCAGAAGGTGGTTGTCTTTGGTGAGGGCACG 7934 Query 517390 TTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 517447 |||||| ||| ||| ||||| || ||| ||| ||| || || || ||||| || ||| Sbjct 7935 TTCACCTTCGTAAACCTGGATTGTGACTGCAGGTTGGTTGTCGGAGTAAGTGGTGAAT 7992 >seq46837 Length=2519 Score = 109 bits (120), Expect = 4e-18 Identities = 650/1020 (64%), Gaps = 35/1020 (3%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || ||||||||||||| || || |||||||| ||||| || |||||||| | || ||| Sbjct 1004 ATGCCATTGGCATCCATGTCGAAGGTGACTTCTATTTGTGGAACCCCTCTTGGTGCTGGT 945 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | || ||||| |||| || || ||||| |||| |||||| Sbjct 944 GGAATGCCGTTGAGGTTGAATGTCCCCAACAGATGGTTGTCTTTGGTGAGAGCACGTTCA 885 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || ||| ||| |||||| || ||| ||| ||| || || || || || || || |||| Sbjct 884 CCTTCGTAAACTTGGATGGTGACTGCAGGTTGGTTGTCGGAGTATGTGGTGAA-CGTCTG 826 Query 517454 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 || | || || || || || ||| | || | ||| |||||| | || || || Sbjct 825 CGAAGTCTTGCATGGGATGCGTGAGTTGCGCTCCACAATGCGGGTCATGACCCCGCCCGC 766 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAA-GTTTTT 517571 || || | || | || || || | || ||||| || | || | ||| | | | Sbjct 765 CGTCTCGATGCCTAACGACAGCGGCGCCACGTCAACCAGTAGAACGTCACGAATGCTGTC 706 Query 517572 CATC-AGTTT--GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 || | | | | ||||| | || ||||||| ||||| || || ||||| || | Sbjct 705 GCTCGAATCTCCGCTCAACACG----GCAGCTTGAACCGCAGCGCCGTAGGCAACGGCCT 650 Query 517629 CATCAGGATTAACAGTTTCAT--TTAGTTTTTTACCATTGAAAAAAT--TTGAAAGAAGT 517684 | || || ||| | ||| |||| ||| || |||||||| | ||| || || Sbjct 649 CGTCTGGGTTA--ATGCCCATGGAGAGTTCTTTGCCGTTGAAAAAGTCCTTG--AGCAGC 594 Query 517685 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 | ||| || || || || |||| || || || || | ||| | || || | ||| || Sbjct 593 T-TCTGGACTTTTGGGATTCGAGTGGAACCGCCCACGAGTACTACGTCGTGAATCTGCGA 535 Query 517744 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT-CTAAACA 517802 ||||||| || | || | || || || || || | | ||| | |||| Sbjct 534 CTTATCCATCTTGGCGTCGCGAAGTGCTCGCTCCACTGGCTCCA-ATGTGCTCCGGAACA 476 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCT 517861 ||| || || |||||||| | |||| || | || | || || ||||| ||| Sbjct 475 GGTCCATGCAGAGCTCTTCGAACCTGGCTCGGGTGATCTTG-CTGTAGAAGTCAATGCCT 417 Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921 || |||| | || | ||||| | | | | ||| || |||| | || || Sbjct 416 TCAAACAGCGCGTCGATCTCAATGCTCGCCTCGGCAGAACTCGACAGTGTCCTCTTGGCG 357 Query 517922 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AAATCTGTTT 517979 || ||||| || || | |||||||| | ||| | | | || | || | ||| | Sbjct 356 CGCTCACAGGCAGTGCGGAGTCTTCGCACGGC--TCGAGGGTTCACTCTGAGGTCTTTGC 299 Query 517980 TATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTC 518037 | ||| |||||||| || | |||| || | || | || || ||||| ||||| Sbjct 298 GGTGTTTCCTCTTGAATTC--CTGCACAAAGTGCTCCACCATTCGGTTGTCAAAGTCTTC 241 Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAG 518094 |||||| | | || | |||| ||| | | |||| ||| | || || || | Sbjct 240 ACCTCCGAGATGTGTGTCACCTGCCGTGGAGCGCACTTCGAACATGGAACCCTCGTCGAT 181 Query 518095 AGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 518154 | || | | ||||| ||| |||||||| | ||| || || || || ||| | || Sbjct 180 GGTCAGCACCGAAACATCGAAGGTGCCACCACCGAGATCGAAGATGAGGACGTTCTTCTC 121 Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 | |||| ||||| || ||||| |||| || || ||||| ||||| || || || Sbjct 120 TCCACGCAGGTTCTTATCGAGGCCATAGGCAAGCGCGGCTGCAGTAGGTTCGTTGATGAT 61 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 | || || || |||||||| || || |||||||| || || || || || ||||| Sbjct 60 GCGCAGCACGTTGAGACCAGCGATAGCACCGGCATCTTTCGTCGCCTGCCTCTGAGAATC 1 >seq40474 Length=22114 Score = 96.9 bits (106), Expect = 3e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 517271 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 517330 || || || ||||| |||| || || ||||||||||| || || |||||||| |||| Sbjct 20988 AGGATGCCGTTGGCGTCCATGTCGAAGGTGACTTCAATCTGTGGAACCCCTCTGGGAGCT 21047 Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390 ||||| || || | | || |||||||||||| | || ||||| |||| ||| Sbjct 21048 GGTGGAATGCCGTTGAGGTTGAATGTTCCCAGAAGGTGGTTGTCTTTGGTGAGGGCACGT 21107 Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAA 517446 ||||| ||| ||| ||||| || || ||| ||| || || || ||||| || || Sbjct 21108 TCACCTTCGTAAACCTGGATTGTGACAGCAGGTTGGTTGTCGGAGTAAGTGGTGAA 21163 >seq114166 Length=9610 Score = 86.0 bits (94), Expect = 5e-11 Identities = 186/281 (66%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 517271 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 517330 || |||||||||||||||| || || || ||||| || || || || || | | || Sbjct 184 AGGATACCATTGGCATCCATGTCGAAGGTCACTTCGATCTGGGGAACGCCACGAGGCGCC 243 Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390 |||||||| || | || ||||| || ||||| | || ||||| |||| || Sbjct 244 GGTGGGATGCCRTTCAGGTTAAAMGTWCCCAGGAGGTGGTTGTCTTTGGTGAGRGCGCGC 303 Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450 || || ||||| | ||||| || || | | || || || || || || || || Sbjct 304 TCRCCTTCGAAGACCTGGATGGTGACMGCGGGCTGGTTGTCCGAGTATGTCGTRAAGGTC 363 Query 517451 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCT 517510 | || | || ||||| || ||||| | || | || |||||| | |||||| Sbjct 364 TTCGACGTCTTGCAAGGGATGCGAGTGTTYCGCTCCACGATGCGGGTCATGACACCACCA 423 Query 517511 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG 517551 || || || | ||| || || ||||||| ||||| || || Sbjct 424 GCAGTCTCAATACCCAGGGACAGAGGAGCCACATCCACCAG 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3771141689313304