Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq115183 125 2e-24 >seq115183 Length=152922 Score = 125 bits (138), Expect = 2e-24 Identities = 150/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| ||||| |||||||||||||||||||| || || | ||||| |||||||| | Sbjct 137668 ACGGCAAGCTATCTTGCCAGCTCTACCAGCGCAGTGCCGATATTTTCCTGGGCGTGCCCT 137609 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGG 24939 |||||||||| |||||||| ||||||| || | | ||| | || | ||| | | Sbjct 137608 TCAATATCGCCAGCTACGCCTTGCTGACTCACATGATGGCGCAGCAATGTGATCTGGAAG 137549 Query 24940 TCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGG 24999 | || || ||||||||||| || || ||| |||||||| || |||||| |||| || | Sbjct 137548 TGGGTGATTTCATCTGGACTGGTGGTGACTGTCACCTGTACTCCAACCACTTCGAACAAG 137489 Query 25000 C-GACCGAACAACTGTCGCGC 25019 | || | ||| || |||||| Sbjct 137488 CAGAGC-TACAGCTCTCGCGC 137469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163792473597632