Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq115183 86.0 5e-12 >seq115183 Length=152922 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 29881 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 29940 || |||||||||| || || | | |||||||||||| || ||||| || || || Sbjct 137566 TGCGCCATCATGTGAGTCAGCAAGGCGTAGCTGGCGATATTGAAGGGCACGCCCAGGAAA 137625 Query 29941 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGA 30000 || || | | |||||||||||| || || |||| ||||| ||| |||||||| Sbjct 137626 ATATCGGCACTGCGCTGGTAGAGCTGGCAAGATAGCTTGCCGTCTGCCACATAAAACTGG 137685 Query 30001 CACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCA 30037 ||| || |||||| || || || ||||| |||||| Sbjct 137686 AACAGGGCGTGGCATGGGGGCAGGGCCATCTGGCCCA 137722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407646076412732