Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq122304 86.0 4e-12 seq121303 86.0 4e-12 >seq122304 Length=34685 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 45236 GCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGAA 45295 |||||| |||||||| |||||||||||| ||||||||| || ||||| ||||||||| Sbjct 3125 GCGCCCGTAGCTCAGTCGGATAGAGCACGAGCCTTCTAAGCTTGGGGTCGCAGGTTCGAA 3066 Query 45296 TCCTACAGGGCGTGCCA 45312 |||| | ||||| |||| Sbjct 3065 TCCTGCCGGGCGCGCCA 3049 >seq121303 Length=33816 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 45236 GCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCGAA 45295 |||||| |||||||| |||||||||||| ||||||||| || ||||| ||||||||| Sbjct 2256 GCGCCCGTAGCTCAGTCGGATAGAGCACGAGCCTTCTAAGCTTGGGGTCGCAGGTTCGAA 2197 Query 45296 TCCTACAGGGCGTGCCA 45312 |||| | ||||| |||| Sbjct 2196 TCCTGCCGGGCGCGCCA 2180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355846328299108