Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq195083 84.2 6e-12 >seq195083 Length=147271 Score = 84.2 bits (92), Expect = 6e-12 Identities = 86/109 (79%), Gaps = 5/109 (5%) Strand=Plus/Plus Query 45192 CGCAGATTCTCGC--TATTTATGAAAATTTTCTGGTTTATGCCATTTCCGTTCTTCTTCT 45249 ||| | || |||| ||||||||||||||||| |||||| | | ||||||||||||||| Sbjct 53767 CGCGGGTTTTCGCCGTATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCGTTCTTCTTCG 53826 Query 45250 TGTTTACTCATTGTTTTTGTTAAAA-ACGTCCTCTCTCCAGAAAGGAAA 45297 | | ||| | ||||||| |||||| || ||||| |||||||||| Sbjct 53827 TCATAACTTAATGTTTTTATTAAAATAC--CCTCTGAAAAGAAAGGAAA 53873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144713574833024