Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_021349.1 Length=154872 Score E Sequences producing significant alignments: (Bits) Value seq121756 93.3 4e-14 >seq121756 Length=20875 Score = 93.3 bits (102), Expect = 4e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 113194 TGGGCATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACC 113253 ||||||||||||||||||||||| || || || | || ||||||||||||||||| | Sbjct 1403 TGGGCATCACCTCGATCGACCCGGTCGAGCACCAGTTGCTGTTCGAGCGCTTCATCTCCG 1462 Query 113254 CGGACCGCCCCGACTTCCCCGACATCGACGTCGACTTCCAG 113294 ||| |||| ||| ||||| ||||||||||| ||| || Sbjct 1463 AGGAACGCCACGAGCCACCCGATATCGACGTCGATTTCGAG 1503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494254190164480