Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq14957 150 1e-30 seq118618 138 8e-27 seq82194 134 1e-25 seq45273 129 4e-24 seq46837 113 3e-19 seq184460 109 4e-18 seq40474 100 2e-15 seq114166 91.5 1e-12 seq59496 86.0 5e-11 >seq14957 Length=29832 Score = 150 bits (166), Expect = 1e-30 Identities = 690/1070 (64%), Gaps = 36/1070 (3%) Strand=Plus/Plus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || || |||||||||| || || |||||||| ||||| || |||||||| | || ||| Sbjct 10279 ATGCCGTTGGCATCCATGTCGAAGGTGACTTCTATTTGTGGAACCCCTCTTGGTGCTGGT 10338 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | || ||||| |||| || ||| ||||| |||| |||||| Sbjct 10339 GGAATGCCGTTGAGGTTGAATGTCCCCAACAGATGATTGTCTTTGGTGAGAGCACGTTCA 10398 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || ||| ||| |||||| || ||| ||| ||| || || || || || || || |||| Sbjct 10399 CCTTCGTAAACTTGGATGGTGACTGCAGGTTGGTTGTCGGAGTATGTGGTGAACG-TCTG 10457 Query 281621 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 || | || || || || || ||| | || | ||| |||||| | || || || Sbjct 10458 CGAAGTCTTGCATGGGATGCGTGAGTTGCGCTCCACAATGCGGGTCATGACCCCGCCCGC 10517 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 281739 || || | || | || || || | |||||||| || | || || ||| | || Sbjct 10518 CGTCTCGATGCCTAACGACAGCGGCGCCACATCAACCAGTAGAACATCACGAATGCTGTC 10577 Query 281740 A-TC-AGTTT--GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 || | | | | ||||| | || ||||||| ||||| || || ||||| || | Sbjct 10578 GCTCGAATCTCCGCTCAACACG----GCAGCTTGAACCGCAGCGCCGTAGGCAACGGCCT 10633 Query 281796 CATCAGGATTAACAGTTTCATTTAG--TTTTTTACCATTGAAAAAAT--TTGAAAGAAGT 281851 | || || || | ||| || || ||| || ||||| |||| |||| | || Sbjct 10634 CGTCCGGGTTGATGCC--CATGGAGAGTTCTTTGCCGTTGAAGAAATCCTTGA--GCAGC 10689 Query 281852 TGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910 | ||| || || || || |||| || || || || | ||| | || || | ||| || Sbjct 10690 T-TCTGGACTTTTGGGATTCGAGTGGAACCGCCCACGAGTACTACGTCGTGAATCTGCGA 10748 Query 281911 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTA-AACA 281969 ||||||| || | || | || || || || || | | |||| |||| Sbjct 10749 CTTATCCATCTTGGCGTCGCGAAGTGCTCGCTCCACTGGCTCCA-ATGTGCTCCGGAACA 10807 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCT 282028 ||| || || |||||||| | |||| ||| | | || || || || | ||| Sbjct 10808 GGTCCATGCAGAGCTCTTCGAACCTGGCTCGAGTGATCTT-ACTGTAGAAGTCCACGCCT 10866 Query 282029 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 282088 ||||||| | || | ||||| | | | | ||| || |||| | || || Sbjct 10867 TCGAACAGTGCGTCGATCTCAATGCTCGCCTCGGCAGAACTCGACAGTGTCCTCTTGGCG 10926 Query 282089 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTA 282148 || ||||| || || | |||||||| | |||| | |||| | || | | ||| Sbjct 10927 CGCTCACAGGCAGTGCGGAGTCTTCGCACGGCTCGAG--GATTCACTCTGAGGTCTTTGC 10984 Query 282149 --TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCTTC 282204 | ||| |||||||| || | ||| | || | || | || || ||||| ||||| Sbjct 10985 GGTGTTTCCTCTTGAATTCCTGCACAAAG--TGCTCCACCATTCGGTTGTCAAAGTCTTC 11042 Query 282205 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAG 282261 |||||| | | || | |||| ||| | | |||| ||| | || || || | Sbjct 11043 ACCTCCGAGATGTGTGTCACCTGCCGTGGAGCGCACTTCGAACATGGAGCCTTCGTCGAT 11102 Query 282262 AGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 282321 | || | | |||||| ||| |||||||| | ||| || || || || ||| | || Sbjct 11103 GGTCAGCACCGAAACATCGAAGGTGCCACCACCGAGATCGAAGATGAGGACGTTCTTCTC 11162 Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 | | |||| ||||| || ||||| |||| || || ||||| ||||| || || || Sbjct 11163 TCCGCGCAGGTTCTTATCGAGGCCATAGGCAAGCGCGGCTGCAGTAGGTTCGTTGATGAT 11222 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | || || || |||||||| || || |||||||| || || || || || ||||| Sbjct 11223 GCGCAGCACGTTGAGACCAGCGATAGCGCCGGCATCTTTCGTCGCCTGCCTCTGAGAATC 11282 Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTTTTCCA 282490 ||| || || || || || || ||||| || || | | ||||||| ||| Sbjct 11283 GTTGAAGTAAGCGGGCACCGTGATAACAGCGTCGCTCACCTTCTTTCCCA 11332 >seq118618 Length=1519 Score = 138 bits (152), Expect = 8e-27 Identities = 206/287 (72%), Gaps = 9/287 (3%) Strand=Plus/Minus Query 282269 AGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT 282328 |||| || ||| ||| |||||||||| || || | | | ||| | ||| || Sbjct 1519 AGAGAGACGTCAAAGGTGCCACCACCCAAGTCGAAGACCAAGATGTTCTTCTCTCCCTCC 1460 Query 282329 TGGTTTTTATCAAGACCATACGCAAAA-GCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 | ||||| ||||||||||| |||| ||||||||||| |||||||| ||||| |||| Sbjct 1459 T--TTTTTGTCAAGACCATATGCAATTCGCAGCAGCAGTAGGTTCATTGATAATCCTCAT 1402 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT-CGTTAA 282446 ||||| ||||| || || |||| ||||| || ||||| || | ||| | || |||| | Sbjct 1401 CACATTGAGACCTGCGATGGTTCCAGCATCCTTGGTGGCCTGGCGTTGGGCATCCGTTGA 1342 Query 282447 AATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTG 282506 |||| || ||||| || | || |||| ||||||| ||||||| ||||| || | Sbjct 1341 AATAGGCTGGAACTGTCACGACAGCATGAGTTACTTTCTTTCCAAGGTAAGCCTCCGCAG 1282 Query 282507 TTTGTTTCATTTT--ACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 ||| |||||||| || ||| ||| | || |||| ||| |||| Sbjct 1281 TTTCCTTCATTTTGGAC---AAACCATGGCAGAGATTTCTTCGGGAG 1238 >seq82194 Length=16608 Score = 134 bits (148), Expect = 1e-25 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || ||||| | ||||| || ||||||||||| || |||||||||||||| | |||| Sbjct 10194 TTCTTATCCATTCCATAGGCCAAAGCAGCAGCGGTAGGTTCATTAATAATACGTTTAACA 10135 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 |||||||| |||||| | |||||||||||||| ||||| | ||| ||||| ||||| || Sbjct 10134 TTAAGACCCGCAATTTTACCTGCATCTTTAGTCGCTTGACGTTGGGAATCATTAAAGTAA 10075 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 || || || || || || ||||| |||| | || | |||| | | | |||| | Sbjct 10074 GCTGGTACTGTGATTACTGCATCCGTTAAGGGATGGCCTAAATAATCTTCTACCGTTTTT 10015 Query 282512 TTCATTTTACTTAAAATCATTGA--TGAAATTTGT 282544 |||||||| |||| | |||| ||||||||| Sbjct 10014 TTCATTTTCATTAAGA--CTTGAGCGGAAATTTGT 9982 Score = 105 bits (116), Expect = 5e-17 Identities = 264/400 (66%), Gaps = 16/400 (4%) Strand=Plus/Minus Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 |||| |||||| || | |||| ||||||||| || ||||| | |||||| || ||| Sbjct 11121 GTTGCTTTATCTTTCGCCGAAACATGAAGAATACCGTTAGCATCAATATCAAAAGTAACT 11062 Query 281471 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 281530 |||||||| || || || | | | || ||||| || || || | ||| ||| || Sbjct 11061 TCAATTTGTGGTACACCACGCGGTGCTGGTGGAATATCTGTTAAGTCAAAACGTCCAAGC 11002 Query 281531 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 281590 ||||| || || | | || || || | |||| || | ||||| ||||| Sbjct 11001 GATTTATTCGCTGAAGCCATCTCGCGCTCTCCTTGTAAAACATGAACTGTAACAGCAGTT 10942 Query 281591 TGATTATCTGAATAAGTTGTAAATACTCTGGATT--TTTTACAAGGAATTGTTGTGTTTC 281648 ||||||| | | |||| ||||| | |||| || || ||||| || ||| Sbjct 10941 TGATTATTTTCAGCCGTTGAAAATA--TTTGATTAGCCTTCGTTGGGATTGTGGTATTTT 10884 Query 281649 TATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGA 281708 ||||||| | |||||||||| || || ||||| | || ||||| || || |||| Sbjct 10883 TATCAATTAATTTGGTCATAACGCCCCCTAAAGTTTCAATTCCTAGAGAGAGTGGCGTGA 10824 Query 281709 CATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTT 281768 |||||| || | || || || | | || | | |||| | ||| ||| Sbjct 10823 CATCAAGTAACAAAACATCTT-----------TTACTTCGCCGGACAA-TACAGCACCTT 10776 Query 281769 GAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAAC 281808 ||||||| |||||| || |||||||| || |||||||| Sbjct 10775 GAATAGCCGCACCAATAGCCACAGCTTCGTCCGGATTAAC 10736 >seq45273 Length=11515 Score = 129 bits (142), Expect = 4e-24 Identities = 684/1070 (64%), Gaps = 36/1070 (3%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || |||||||| |||| || || ||||||||||| || || |||||||| |||| ||| Sbjct 4155 ATGCCATTGGCGTCCATGTCGAAGGTGACTTCAATCTGTGGAACCCCTCTGGGAGCTGGT 4096 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | || ||||| |||| || || ||||| |||| |||||| Sbjct 4095 GGAATGCCGTTAAGGTTGAATGTCCCCAACAGATGGTTGTCTTTGGTGAGAGCACGTTCA 4036 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || ||| ||| |||||| || ||| ||| ||| || || || || || || || |||| Sbjct 4035 CCTTCGTAAACTTGGATGGTGACTGCAGGTTGGTTGTCGGAGTATGTGGTGAACG-TCTG 3977 Query 281621 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 || |||| || || || | ||| | || | ||| |||||| | || || || Sbjct 3976 CGAAGTTTTGCATGGGATGCGCGAGTTGCGCTCCACAATGCGGGTCATGACCCCGCCCGC 3917 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 281739 || |||| || | || || || | || ||||| || | || | | | | || Sbjct 3916 CGTCTCTATGCCTAACGACAGCGGCGCCACGTCAACCAGTAGAACGTCACGGATGCTGTC 3857 Query 281740 A--TCAGTTT--GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 | | | | | ||||| | || ||||||| ||||| || |||||||| |||| Sbjct 3856 GCTTGAATCTCCGCTCAACACG----GCAGCTTGAACCGCAGCGCCGTATGCAACGGCTT 3801 Query 281796 CATCAGGATTAACAGTTTCATTTA--GTTTTTTACCATTGAAAAAAT--TTGAAAGAAGT 281851 | || ||||| | ||| | ||| ||| || ||||| || | |||| | || Sbjct 3800 CGTCTGGATTGATGCC--CATGGAAAGTTCTTTGCCGTTGAAGAACTCCTTGA--GCAGC 3745 Query 281852 TGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910 | ||| ||||| || || | | || || || || | ||| | || || | ||| || Sbjct 3744 T-TCTGCACCTTGGGGATTCTTGTAGAACCGCCCACGAGTACGACGTCGTGGATCTGCGA 3686 Query 281911 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT-CTAAACA 281969 ||| |||| || | ||| | | || || || || | | ||| | |||| Sbjct 3685 TTTGTCCATCTTGGCATCGCGAAGTGCCCGCTCCACAGGCTCCA-ATGTGCTGCGGAACA 3627 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCT 282028 ||| || || || ||||| | |||| ||| | || | || || || | ||| Sbjct 3626 GGTCCATGCAGAGCTCCTCGAACCTGGCTCGAGTGATCTTG-CTGTAGAAGTCGACGCCT 3568 Query 282029 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 282088 ||||||| | || | || || | | | | |||| || |||| | || || Sbjct 3567 TCGAACAGCGCGTCGATCTCGATGCTCGCCTCGGCCGAACTCGAGAGTGTCCTCTTGGCG 3508 Query 282089 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTA 282148 || ||||| || || | |||||||| | |||| | | || | || | | ||| Sbjct 3507 CGCTCACAGGCAGTGCGGAGTCTTCGCACGGCTCGAG--GGTTCACTCTGAGGTCTTTGC 3450 Query 282149 --TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCTTC 282204 | | | |||||||| || | ||| | || | || | || || ||||||||||| Sbjct 3449 GGTGTATCCTCTTGAATTCCTGCACAAAG--TGCTCCACCATTCGGTTGTCAAAATCTTC 3392 Query 282205 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAG 282261 ||||| | | || | |||| ||| | | |||| ||| | || || || | Sbjct 3391 TCCTCCGAGATGTGTGTCACCTGCCGTGGAGCGCACTTCGAACATGGAGCCTTCGTCGAT 3332 Query 282262 AGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 282321 | || | | ||||| ||| || || || | ||| ||||| || || ||| | || Sbjct 3331 GGTCAGCACGGAGACATCGAAGGTGCCTCCGCCGAGATCGAAAATGAGGACGTTCTTCTC 3272 Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 | || |||| ||||| || ||||| |||| || || ||||| |||||||| || || Sbjct 3271 TCCGTGCAGGTTCTTATCGAGGCCATAGGCAAGCGCGGCTGCAGTAGGTTCATTGATGAT 3212 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | || || || |||||||| || || |||||||| || || || || || ||||| Sbjct 3211 GCGCAGCACGTTGAGACCAGCGATAGCGCCGGCATCTTTCGTCGCCTGCCTCTGAGAATC 3152 Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTTTTCCA 282490 ||| || || || || || || || || || || | | ||||||| ||| Sbjct 3151 GTTGAAGTAAGCGGGCACCGTGATMACAGCGTCGCTCACCTTCTTTCCCA 3102 >seq46837 Length=2519 Score = 113 bits (124), Expect = 3e-19 Identities = 651/1020 (64%), Gaps = 35/1020 (3%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || ||||||||||||| || || |||||||| ||||| || |||||||| | || ||| Sbjct 1004 ATGCCATTGGCATCCATGTCGAAGGTGACTTCTATTTGTGGAACCCCTCTTGGTGCTGGT 945 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | || ||||| |||| || || ||||| |||| |||||| Sbjct 944 GGAATGCCGTTGAGGTTGAATGTCCCCAACAGATGGTTGTCTTTGGTGAGAGCACGTTCA 885 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || ||| ||| |||||| || ||| ||| ||| || || || || || || || |||| Sbjct 884 CCTTCGTAAACTTGGATGGTGACTGCAGGTTGGTTGTCGGAGTATGTGGTGAA-CGTCTG 826 Query 281621 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 || | || || || || || ||| | || | ||| |||||| | || || || Sbjct 825 CGAAGTCTTGCATGGGATGCGTGAGTTGCGCTCCACAATGCGGGTCATGACCCCGCCCGC 766 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAA-GTTTTT 281738 || || | || | || || || | || ||||| || | || | ||| | | | Sbjct 765 CGTCTCGATGCCTAACGACAGCGGCGCCACGTCAACCAGTAGAACGTCACGAATGCTGTC 706 Query 281739 CATC-AGTTT--GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 || | | | | ||||| | || ||||||| ||||| || || ||||| || | Sbjct 705 GCTCGAATCTCCGCTCAACACG----GCAGCTTGAACCGCAGCGCCGTAGGCAACGGCCT 650 Query 281796 CATCAGGATTAACAGTTTCAT--TTAGTTTTTTACCATTGAAAAAAT--TTGAAAGAAGT 281851 | || || ||| | ||| |||| ||| || |||||||| | ||| || || Sbjct 649 CGTCTGGGTTA--ATGCCCATGGAGAGTTCTTTGCCGTTGAAAAAGTCCTTG--AGCAGC 594 Query 281852 TGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910 | ||| || || || || |||| || || || || | ||| | || || | ||| || Sbjct 593 T-TCTGGACTTTTGGGATTCGAGTGGAACCGCCCACGAGTACTACGTCGTGAATCTGCGA 535 Query 281911 TTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT-CTAAACA 281969 ||||||| || | || | || || || || || | | ||| | |||| Sbjct 534 CTTATCCATCTTGGCGTCGCGAAGTGCTCGCTCCACTGGCTCCA-ATGTGCTCCGGAACA 476 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCT 282028 ||| || || |||||||| | |||| || | || | || || ||||| ||| Sbjct 475 GGTCCATGCAGAGCTCTTCGAACCTGGCTCGGGTGATCTTG-CTGTAGAAGTCAATGCCT 417 Query 282029 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 282088 || |||| | || | ||||| | | | | ||| || |||| | || || Sbjct 416 TCAAACAGCGCGTCGATCTCAATGCTCGCCTCGGCAGAACTCGACAGTGTCCTCTTGGCG 357 Query 282089 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC--AAATCTGTTT 282146 || ||||| || || | |||||||| | ||| | | | || | || | ||| | Sbjct 356 CGCTCACAGGCAGTGCGGAGTCTTCGCACGGC--TCGAGGGTTCACTCTGAGGTCTTTGC 299 Query 282147 TATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTC 282204 | ||| |||||||| || | |||| || | || | || || ||||| ||||| Sbjct 298 GGTGTTTCCTCTTGAATTC--CTGCACAAAGTGCTCCACCATTCGGTTGTCAAAGTCTTC 241 Query 282205 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAG 282261 |||||| | | || | |||| ||| | | |||| ||| | || || || | Sbjct 240 ACCTCCGAGATGTGTGTCACCTGCCGTGGAGCGCACTTCGAACATGGAACCCTCGTCGAT 181 Query 282262 AGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 282321 | || | | |||||| ||| |||||||| | ||| || || || || ||| | || Sbjct 180 GGTCAGCACCGAAACATCGAAGGTGCCACCACCGAGATCGAAGATGAGGACGTTCTTCTC 121 Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 | |||| ||||| || ||||| |||| || || ||||| ||||| || || || Sbjct 120 TCCACGCAGGTTCTTATCGAGGCCATAGGCAAGCGCGGCTGCAGTAGGTTCGTTGATGAT 61 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | || || || |||||||| || || |||||||| || || || || || ||||| Sbjct 60 GCGCAGCACGTTGAGACCAGCGATAGCACCGGCATCTTTCGTCGCCTGCCTCTGAGAATC 1 >seq184460 Length=11861 Score = 109 bits (120), Expect = 4e-18 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 281437 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 281496 ||| || |||||||| |||| || || ||||||||||| || || |||||||| |||| Sbjct 7815 AAGGATGCCATTGGCGTCCATGTCGAAGGTGACTTCAATCTGTGGAACCCCTCTGGGAGC 7874 Query 281497 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 281556 ||||| || || | | || |||||||||||| | || ||||| |||| || Sbjct 7875 TGGTGGAATGCCGTTGAGGTTGAATGTTCCCAGAAGGTGGTTGTCTTTGGTGAGGGCACG 7934 Query 281557 TTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 281614 |||||| ||| ||| ||||| || ||| ||| ||| || || || ||||| || ||| Sbjct 7935 TTCACCTTCGTAAACCTGGATTGTGACTGCAGGTTGGTTGTCGGAGTAAGTGGTGAAT 7992 >seq40474 Length=22114 Score = 100 bits (110), Expect = 2e-15 Identities = 675/1069 (63%), Gaps = 28/1069 (3%) Strand=Plus/Plus Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497 || || || ||||| |||| || || ||||||||||| || || |||||||| |||| Sbjct 20988 AGGATGCCGTTGGCGTCCATGTCGAAGGTGACTTCAATCTGTGGAACCCCTCTGGGAGCT 21047 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 ||||| || || | | || |||||||||||| | || ||||| |||| ||| Sbjct 21048 GGTGGAATGCCGTTGAGGTTGAATGTTCCCAGAAGGTGGTTGTCTTTGGTGAGGGCACGT 21107 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 ||||| ||| ||| ||||| || || ||| ||| || || || ||||| || || | Sbjct 21108 TCACCTTCGTAAACCTGGATTGTGACAGCAGGTTGGTTGTCGGAGTAAGTGGTGAA-CGT 21166 Query 281618 CTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 ||| || | || || ||||| | ||| | || | || ||||||| || || Sbjct 21167 CTGCGACGTCTTGCATGGAATGCGAGAGTTGCGCTCCACGATGCGCGTCATAACCCCGCC 21226 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||||| || | || | || || || | || ||||| | || | || ||| | Sbjct 21227 CGCTGTCTCGATGCCCAATGACAGCGGCGCCACGTCAACCAAGAGTACATCACGAATGCT 21286 Query 281737 TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 || | | || || | ||||| |||| ||||| ||||| ||||| || || Sbjct 21287 GTCGCTCGAGTCGCCGCTCAGCACGGCTGCCTGAACCGCAGCGCCATAGGCAACGGCCTC 21346 Query 281797 ATCAGGATTAACAGTTTCAT--TTAGTTTTTTACCATTGAAAAAAT--TTGAAAGAAGTT 281852 || || || | ||| |||| || |||||||| || | ||| || || | Sbjct 21347 GTCCGGGTT--GATGCCCATGGAAAGTTCCTTGCCATTGAAGAAGTCCTTG--AGCAGCT 21402 Query 281853 GTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT 281911 ||| ||||| || || |||| || || || || | || | ||||| | || || Sbjct 21403 -TCTGCACCTTTGGGATTCGAGTGGAACCGCCCACGAGCACGACGTCATGGATTTGAGAC 21461 Query 281912 TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT-CTAAACAA 281970 || |||| || | ||| | | || || || || | | ||| | |||| Sbjct 21462 TTGTCCATCTTGGCATCGCGAAGTGCCCGCTCCACAGGCTCCA-ATGTGCTCCGGAACAG 21520 Query 281971 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTT 282029 ||| || || |||||||| | || | || | || | || || || | |||| Sbjct 21521 GTCCATGCAGAGCTCTTCGAACCTGGCYCGGGTGATCTTG-CTGTAGAAGTCGACACCTT 21579 Query 282030 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 282089 |||||| | || | ||||| | | | | ||| || |||| | || || | Sbjct 21580 CGAACAGTGCGTCGATCTCAATGCTCGCCTCGGCAGAACTCGACAGTGTCCTCTTGGCGC 21639 Query 282090 GTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGA--TTCAAATCTGTTTT 282147 | ||||| || || | |||||||| | ||| | | | || | | | || | Sbjct 21640 GCTCACAGGCAGTGCGGAGTCTTCGCACGGC--TCGAGGGTTTACCCTGAGGTCCTTGCG 21697 Query 282148 ATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCA 282205 | ||| |||||||| || | |||| || | || | || || || || ||||| Sbjct 21698 GTGTTTCCTCTTGAATTC--CTGCACAAAGTGCTCCACCATTCGGTTGTCGAAGTCTTCT 21755 Query 282206 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAGA 282262 ||||| | | || | |||| ||| | | |||| ||| | || || || | Sbjct 21756 CCTCCGAGATGTGTGTCACCTGCCGTGGAGCGCACTTCGAACATGGAACCCTCGTCGATR 21815 Query 282263 GACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 282322 | || | | |||||| ||| |||||||| | ||| || || || || ||| | ||| Sbjct 21816 GTCAGCACCGAAACATCGAAGGTGCCACCACCGAGATCGAAGATGAGGACGTTCTTCTCT 21875 Query 282323 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 282382 | | || ||||| || ||||| |||| || || ||||| ||||| || || || Sbjct 21876 CCGCGCAGATTCTTATCGAGGCCATAGGCAAGCGCGGCTGCAGTAGGTTCGTTGATGATG 21935 Query 282383 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442 | || || || |||||||| || || |||||||| || || || || || |||||| Sbjct 21936 CGCAGCACGTTGAGACCAGCGATAGCGCCAGCATCTTTCGTCGCCTGCCTCTGAGAATCG 21995 Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTTTTCCA 282490 || || || || || || || || || || || | | ||||||| ||| Sbjct 21996 TTGAAGTAAGCGGGCACCGTGATGACAGCGTCGCTCACCTTCTTTCCCA 22044 >seq114166 Length=9610 Score = 91.5 bits (100), Expect = 1e-12 Identities = 187/281 (67%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497 || |||||||||||||||| || || || ||||| || || || || || | | || Sbjct 184 AGGATACCATTGGCATCCATGTCGAAGGTCACTTCGATCTGGGGAACGCCACGAGGCGCC 243 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 |||||||| || | || ||||| || ||||| | || ||||| |||| || Sbjct 244 GGTGGGATGCCRTTCAGGTTAAAMGTWCCCAGGAGGTGGTTGTCTTTGGTGAGRGCGCGC 303 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 || || ||||| | ||||| || || | | || || || || || || || || Sbjct 304 TCRCCTTCGAAGACCTGGATGGTGACMGCGGGCTGGTTGTCCGAGTATGTCGTRAAGGTC 363 Query 281618 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCA 281677 | || | || ||||| || ||||| | || | || |||||| | ||||||| Sbjct 364 TTCGACGTCTTGCAAGGGATGCGAGTGTTYCGCTCCACGATGCGGGTCATGACACCACCA 423 Query 281678 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG 281718 || || || | ||| || || ||||||| ||||| || || Sbjct 424 GCAGTCTCAATACCCAGGGACAGAGGAGCCACATCCACCAG 464 >seq59496 Length=32294 Score = 86.0 bits (94), Expect = 5e-11 Identities = 186/281 (66%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497 || ||||||||||| |||| || || || ||||| || || || || || | | || Sbjct 8158 AGGATACCATTGGCGTCCATGTCGAAGGTCACTTCGATCTGGGGAACGCCACGAGGCGCC 8099 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 |||||||| || | || ||||| || ||||| | || ||||| |||| || Sbjct 8098 GGTGGGATGCCRTTCAGGTTAAAMGTWCCCAGGAGGTGGTTGTCTTTGGTGAGRGCGCGC 8039 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 || || ||||| | ||||| || || | | || || || || || || || || Sbjct 8038 TCRCCTTCGAAGACCTGGATGGTGACMGCGGGCTGGTTGTCCGAGTATGTCGTRAAGGTC 7979 Query 281618 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCA 281677 | || | || ||||| || ||||| | || | || |||||| | ||||||| Sbjct 7978 TTCGACGTCTTGCAAGGGATGCGAGTGTTYCGCTCCACGATGCGGGTCATGACACCACCA 7919 Query 281678 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG 281718 || || || | ||| || || ||||||| ||||| || || Sbjct 7918 GCAGTCTCAATACCCAGGGACAGAGGAGCCACATCCACCAG 7878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3731052600024984