Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq121950 95.1 1e-14 >seq121950 Length=5567 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 148134 GCTGGATTAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGAAGGTCGCGGGTTCGAAC 148193 || || ||||||||| |||||||||| ||||||||||||||| || ||||||||||| | Sbjct 3379 GCCGGCTTAGCTCAGATGGTAGAGCACCTGATTTGTAATCAGGGGGCCGCGGGTTCGATC 3320 Query 148194 CCTGCATCCAGCACCAG 148210 |||||| || ||||||| Sbjct 3319 CCTGCAGCCGGCACCAG 3303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484843594469760