Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_027348.2 Length=73882 Score E Sequences producing significant alignments: (Bits) Value seq115183 125 3e-24 >seq115183 Length=152922 Score = 125 bits (138), Expect = 3e-24 Identities = 130/168 (77%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 21683 TGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGC 21742 ||| | ||||| |||||||| || || || |||||||||||||||||||| ||||||||| Sbjct 137654 TGCCAGCTCTACCAGCGCAGTGCCGATATTTTCCTGGGCGTGCCCTTCAATATCGCCAGC 137595 Query 21743 TACGCGCTGCTGACGCACCTCATGGCG-GCCACGGTCGGCATGCAGGCCGAGAAGTTCAT 21801 ||||| ||||||| ||| | |||||| || || | || | | | | ||||| Sbjct 137594 TACGCCTTGCTGACTCACATGATGGCGCAGCAATGT-GATCTGGAAGTGGGTGATTTCAT 137536 Query 21802 CTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGGC 21849 |||| |||| |||||||| ||||||||||| |||||| | || || || Sbjct 137535 CTGGACTGGTGGTGACTGTCACCTGTACTCCAACCACTTCGAACAAGC 137488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235735782075332