Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq17548 86.0 7e-12 >seq17548 Length=139630 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 ||||||||| | || |||||||| |||||||| ||||||||||| || || |||||| Sbjct 3730 AGCTGTTTCTTGCTGCAGATGAAGGAAGACAGCATAGAGGGCATCTATGACACCCTCAAG 3671 Query 19313 GAGTGCGCGCACATCTCCAAGT 19334 ||||||||| ||| ||||||| Sbjct 3670 CAGTGCGCGCTCATTTCCAAGT 3649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547187194848960