Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq9079 192 7e-44 seq48326 187 3e-42 seq176411 176 5e-39 seq74841 172 6e-38 seq4323 167 3e-36 seq3624 158 1e-33 seq10089 109 6e-19 seq173884 98.7 1e-15 >seq9079 Length=83715 Score = 192 bits (212), Expect = 7e-44 Identities = 181/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || ||||||||||| || || || ||||||||| | | Sbjct 2651 AATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATAACCCTAGAGGTTGAGCCTAG 2592 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | |||| ||||||||||||| |||||||||||||| ||||| || ||||| Sbjct 2591 CGACACCATCGAAAATGTGAAGGCTAAAATCCAGGACAAGGAGGGCATTCCACCGGACCA 2532 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||||| || ||||| || ||||| | ||||| | || || || | ||||| || Sbjct 2531 ACAGCGTCTCATCTTTGCAGGCAAGCAGTTGGAGGACGGGCGCACTCTCTCCGACTACAA 2472 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | | || |||||||| || || || || ||| |||| ||||||||||| || Sbjct 2471 TATTCAGAAGGAATCGACCCTCCACCTTGTCCTGCGGCTTCGCGGTGGCCA 2421 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || |||||||| || || || || ||||| | | Sbjct 3334 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACGATCACGCTGGAAGTTGAACCCAGC 3275 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || || || || || ||||||||||||||||| ||||||||| Sbjct 3274 GACACGATCGAGAACGTAAAAGCAAAGATCCAAGACAAGGAGGGAATTCCACCAGACCAG 3215 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| || || |||||||| | ||||| || ||||||| || Sbjct 3214 CAGCGTCTCATCTTTGCTGGCAAACAGCTCGAGGACGGCCGTACACTCTCAGACTACAAC 3155 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || ||||||||||| || || | || ||||| || || Sbjct 3154 ATTCAGAAAGAGTCCACTCTTCACCTTGTGCTACGGCTTCGTGGAGG 3108 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || ||||| ||||| || || || || ||||| || || || |||||| | Sbjct 3565 ATCATGCAGATTTTTGTGAAGACACTCACGGGAAAAACTATCACGCTCGAAGTTGAGCCG 3506 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| | ||||| |||| | ||||| ||||||||||||||||| ||||||||||| ||| Sbjct 3505 AGTGACACCATTGAAAATGTCAAGGCGAAAATTCAGGACAAGGAAGGAATTCCTCCTGAC 3446 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || || || || ||||| || ||||| | ||||| || | || || Sbjct 3445 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACGCTGTCTGATTAC 3386 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || || ||| || ||||| || || | || ||||| || || Sbjct 3385 AACATTCAGAAAGAAAGTACCCTTCACCTTGTGCTACGGCTTCGTGGAGG 3336 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || ||||| || || || || || || || ||| | || Sbjct 2878 ATGCAGATTTTTGTCAAGACACTCACCGGTAAAACCATCACGCTCGAAGTCGAGCCTAGT 2819 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| |||| | ||||| ||||| ||||||||||| || || || || || ||| Sbjct 2818 GACACCATTGAAAATGTCAAGGCAAAAATCCAGGACAAGGAAGGGATCCCACCTGATCAG 2759 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||| || || || || || || | || ||||| | ||||| || Sbjct 2758 CAACGTCTTATCTTTGCGGGCAAACAGCTAGAAGACGGCCGCACCCTGTCTGACTACAAC 2699 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||||||| || || ||||| || ||| | || || ||||| ||| Sbjct 2698 ATTCAAAAGGAGTCGACCCTTCACCTTGTCCTCCGGCTGCGCGGAGGA 2651 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || ||||| || || || || || ||||| | || Sbjct 3106 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAAACGATCACGCTAGAAGTTGAACCCAGT 3047 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || || || || || ||||||||||| || || || |||||| Sbjct 3046 GACACGATCGAGAACGTCAAAGCAAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAG 2987 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| |||||||| | || || || ||||||| || Sbjct 2986 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACACTCTCAGACTACAAC 2927 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || ||||| || || | || |||| |||||||| || Sbjct 2926 ATTCAGAAAGAGTCCACCCTACACTTGGTGCTGCGACTTCGCGGCGG 2880 >seq48326 Length=57257 Score = 187 bits (206), Expect = 3e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || ||||||||||| || || || ||||||||| | | Sbjct 53553 AATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATAACCCTGGAGGTTGAGCCTAG 53612 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | |||| ||||||||||||| |||||||||||||| ||||| || ||||| Sbjct 53613 CGACACCATCGAAAATGTGAAGGCTAAAATCCAGGACAAGGAGGGCATTCCACCGGACCA 53672 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||||| || ||||| || ||||| | || |||| ||||| || | ||||| || Sbjct 53673 ACAGCGTCTCATCTTTGCAGGCAAGCAGTTGGAAGATGGGCGTACTCTCTCCGACTACAA 53732 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | | || |||||||| || || || || ||| |||| ||||| || || || Sbjct 53733 TATTCAGAAGGAATCGACCCTCCACCTTGTCCTGCGGCTTCGTGGCGGCCA 53783 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| || ||||| || || || || || || || ||| | || Sbjct 53098 ATGCAGATTTTTGTCAAGACACTCACCGGTAAAACCATCACGCTCGAAGTCGAGCCCAGT 53157 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| |||| | ||||| || || ||||||||||| || |||||||| || ||| Sbjct 53158 GACACCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 53217 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| ||||| || | || || ||| | ||||| || Sbjct 53218 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGCACACTATCTGACTACAAC 53277 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| |||||||| ||| |||| || |||||||| Sbjct 53278 ATTCAGAAGGAGTCCACCCTTCATCTCGTCCTGCGGCTCCGCGGTGG 53324 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || |||||||| || || || ||||| ||| | || Sbjct 53326 ATGCAAATTTTCGTGAAGACTCTGACGGGCAAGACGATCACCCTGGAGGTCGAGCCGAGT 53385 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| ||||| ||||||||||| || ||||| || || ||| Sbjct 53386 GACACGATTGAGAACGTGAAGGCGAAAATCCAGGACAAGGAAGGGATTCCACCTGATCAG 53445 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || || || || || || | |||||||| | ||||| || Sbjct 53446 CAGCGTCTTATCTTTGCGGGCAAACAGCTAGAAGACGGCCGTACCCTGTCTGACTACAAC 53505 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||||||| || || ||||| || ||| | || || ||||| ||| Sbjct 53506 ATTCAAAAGGAGTCGACCCTTCACCTTGTCCTCCGGCTGCGCGGAGGA 53553 Score = 147 bits (162), Expect = 2e-30 Identities = 171/230 (74%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || ||||| ||||| || || || || ||||| || || || |||||| | Sbjct 52642 ATCATGCAGATTTTTGTGAAGACACTCACGGGAAAAACTATCACGCTCGAAGTTGAGCCT 52701 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| | |||| |||| | ||||| ||||||||||||||||| ||||||||||| ||| Sbjct 52702 AGTGACACTATTGAAAATGTCAAGGCGAAAATTCAGGACAAGGAAGGAATTCCTCCTGAC 52761 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || || || || ||||| || ||| || ||||| || | || || Sbjct 52762 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAG---GACCGTACGCTGTCTGATTAC 52818 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || || ||| || ||||| || || | || ||||| || || Sbjct 52819 AACATTCAGAAAGAAAGTACCCTTCACCTTGTGCTACGGCTTCGTGGAGG 52868 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || |||||||| || || || || ||||| | | Sbjct 52870 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACAATCACGCTGGAAGTTGAACCCAGC 52929 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || || || || || ||||||||||||||||| ||||||||| Sbjct 52930 GACACGATCGAGAACGTAAAAGCAAAGATCCAAGACAAGGAGGGAATTCCACCAGACCAG 52989 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| |||||||| | || || || | ||||| || Sbjct 52990 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACACTTTCGGACTACAAC 53049 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| || || | || |||| ||||| || || Sbjct 53050 ATCCAGAAAGAGTCCACCCTCCACTTGGTGCTGCGACTTCGTGGCGG 53096 >seq176411 Length=6678 Score = 176 bits (194), Expect = 5e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 5025 ATGCAAATCTTCGTTAAGACCCTCACCGGCAAGACCATAACCCTGGAGGTCGAGCCCAGC 4966 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| |||| ||||||||||||| |||||||||||||| ||||| |||||||| Sbjct 4965 GACACCATCAAAAATGTGAAGGCTAAAATCCAGGACAAGGAGGGCATTCCACCAGACCAA 4906 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| | ||||| | || || || || || || || Sbjct 4905 CAGCGTCTCATCTTTGCAGGCAAGCAGTTGGAGGACGGCCGCACTCTCGCCGATTACAAC 4846 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || |||||||| || || || || ||| |||| || || ||||| || Sbjct 4845 ATTCAGAAGGAATCGACCCTCCACCTTGTCCTGCGGCTCCGTGGTGGCCA 4796 Score = 82.4 bits (90), Expect = 9e-11 Identities = 100/135 (74%), Gaps = 5/135 (4%) Strand=Plus/Minus Query 27482 TGAAGGCTAAAATTCAGGACAAGG-AGGGAATTCCTCCAGA----CCAGCAGCGTCTAAT 27536 ||||||| |||||| ||||| | ||| |||||||| | |||||||||||| || Sbjct 5185 TGAAGGCCAAAATTTCAGACAAAGCAGGCCATTCCTCCGGGGACCCCAGCAGCGTCTTAT 5126 Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596 ||| || || ||||| ||||| || | || ||||| | ||||| || | |||||||| Sbjct 5125 TTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACCCTCTCGGACTACAACATTCAAAAGGA 5066 Query 27597 ATCCACTCTTCATCT 27611 || || ||||| || Sbjct 5065 GTCTACCCTTCACCT 5051 >seq74841 Length=4471 Score = 172 bits (190), Expect = 6e-38 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 2989 ATGCAAATCTTCGTTAAGACCCTCACCGGCAAGACCATAACCCTGGAGGTCGAGCCCAGC 3048 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| |||| ||||||||||||| |||||||||||||| ||||| |||||||| Sbjct 3049 GACACCATCAAAAATGTGAAGGCTAAAATCCAGGACAAGGAGGGCATTCCACCAGACCAA 3108 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| | ||||| | || || || | || || || Sbjct 3109 CAGCGTCTCATCTTTGCAGGCAAGCAGTTGGAGGACGGCCGCACTCTCTCCGATTACAAC 3168 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || |||||||| || || || || ||| |||| || || ||||| || Sbjct 3169 ATTCAGAAGGAATCGACCCTCCACCTTGTCCTGCGGCTCCGTGGTGGCCA 3218 Score = 129 bits (142), Expect = 7e-25 Identities = 119/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 ||||||| |||||||||||||| || || |||||||| |||||||||||||| ||||| | Sbjct 2837 TGAAGGCCAAAATTCAGGACAAAGAAGGCATTCCTCCGGACCAGCAGCGTCTTATTTTCG 2896 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601 | || ||||| ||||| || | || ||||| | ||||| || | |||||||| || | Sbjct 2897 CCGGCAAGCAGCTCGAAGACGGCCGCACCCTCTCGGACTACAACATTCAAAAGGAGTCTA 2956 Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || ||| | || || ||||| || Sbjct 2957 CCCTTCACCTCGTCCTCCGGCTGCGCGGAGG 2987 >seq4323 Length=113087 Score = 167 bits (184), Expect = 3e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 37122 ATGCAAATCTTCGTTAAGACCCTCACCGGCAAGACCATAACCCTGGAGGTCGAGCCCAGC 37063 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| |||| ||||||||||||| |||||||||||||| ||||| |||||||| Sbjct 37062 GACACCATCAAAAATGTGAAGGCTAAAATCCAGGACAAGGAGGGCATTCCACCAGACCAA 37003 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| | ||||| | || || || | || || || Sbjct 37002 CAGCGTCTCATCTTTGCAGGCAAGCAGTTGGAGGACGGCCGCACTCTCTCCGATTACAAC 36943 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || |||||||| || || || || ||| | || || || ||||| || Sbjct 36942 ATTCAGAAGGAATCGACCCTCCACCTTGTCCTCCGGCTCCGTGGTGGCCA 36893 Score = 129 bits (142), Expect = 7e-25 Identities = 119/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 ||||||| |||||||||||||| || || |||||||| |||||||||||||| ||||| | Sbjct 37274 TGAAGGCCAAAATTCAGGACAAAGAAGGCATTCCTCCGGACCAGCAGCGTCTTATTTTCG 37215 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601 | || ||||| ||||| || | || ||||| | ||||| || | |||||||| || | Sbjct 37214 CCGGCAAGCAGCTCGAAGACGGCCGCACCCTCTCGGACTACAACATTCAAAAGGAGTCTA 37155 Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || ||| | || || ||||| || Sbjct 37154 CCCTTCACCTCGTCCTCCGGCTGCGCGGAGG 37124 >seq3624 Length=53740 Score = 158 bits (174), Expect = 1e-33 Identities = 300/442 (68%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 31961 AGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACG 32020 |||| || || || | ||| |||||| || ||||| |||||||||||| | | | Sbjct 4726 AGCGTTCGATCCCGTCCCTGGTGGACGGGCTGAAGCCGGGACAGCGCAAGGTTCTCTTCA 4667 Query 32021 CCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGG 32080 | || | ||| ||| | | || || ||||| || |||||| | || | ||||| Sbjct 4666 CTTGTTTTAAGCGCAACGACAAGCGCGAAATTAAGGTCGCCCAGCTGGCAGGGTCCGTGG 4607 Query 32081 CAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTG 32140 | ||||| | || ||||| ||||||||||| || || | ||||| ||||| | | Sbjct 4606 CCGAGCATTCTGCGTATCATCACGGCGAGGCCTCCCTAATGTCGACCATCATCAACTTGG 4547 Query 32141 CTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGA 32200 | ||||| |||||||| | || || | ||| | || ||||| || |||||||| | Sbjct 4546 CGCAGAATTTTGTCGGCTCCAACAATATCAACCTGCTGCAGCCAATCGGTCAGTTTGGCA 4487 Query 32201 CCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCAC 32260 | |||| ||||||||||| || || ||| | || || ||||||||| || ||| Sbjct 4486 CAAGGCTGCAGGGTGGCAAGGACGCGGCCAGCCCTCGATATATCTTCACCATGCTATCAC 4427 Query 32261 CTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATG 32320 | | |||| || | | | | ||||||| | || | ||||| | |||| Sbjct 4426 CCCTGGCGCGTCTCATCGTTCCCACTTTGGACGATCCAGTCTTGGAGTACTTGTACGATG 4367 Query 32321 ACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACG 32380 || ||||| | ||||||| || ||||| |||||||| || ||| | | ||||| | Sbjct 4366 ACAACCAGCGCATTGAGCCGGAGTACTACATCCCGGTGCTCCCCATGGTTCTCGTGAATG 4307 Query 32381 GTGCAGAAGGCATCGGAACGGG 32402 ||||||| || ||||| || || Sbjct 4306 GTGCAGAGGGAATCGGCACCGG 4285 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/175 (72%), Gaps = 5/175 (3%) Strand=Plus/Minus Query 31179 GTCCAA-AAAGTCTCGAA--TTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGG 31235 |||||| ||| ||| || | | ||| ||||| ||||| || ||||||||| || || Sbjct 6542 GTCCAAGAAACACTCCAAGCTGAAGGGCATTCCAAAGCTGGAGGACGCCAACGACGCTGG 6483 Query 31236 TACCCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGC-AAAGGCGC 31294 ||| | || ||| || |||||||| || | |||||||| |||||||| ||| || | Sbjct 6482 CACCAAGAACTCGGTTGACTGCACGCTCATCCTAACCGAGGGAGACTCGGCCAAAAGC-C 6424 Query 31295 TTGCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCT 31349 | || | | ||| || || ||||| ||| | |||||| ||||||||||| Sbjct 6423 TGGCCGTGTCGGGCCTGTCAGTGGTGGGCCGCGACAAGTTCGGCGTGTTTCCGCT 6369 >seq10089 Length=115771 Score = 109 bits (120), Expect = 6e-19 Identities = 163/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 ||||| ||||| || ||||||||||| | ||| | ||| | ||| || || | Sbjct 72327 GACGGTCTCAAACCGGGCCAGCGCAAGGTCCTCTACACGTGCTTTAAGCGCAA--TGACA 72384 Query 32044 AGTG--ACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACC 32101 || | | || |||||||| ||| || |||| | |||||| ||||| ||||||| || | Sbjct 72385 AGCGGGAAATCAAGGTGGCCCAGTTGGCGGGTTCCGTGGCCGAGCATTCGGCCTACCATC 72444 Query 32102 ACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAA 32161 |||| |||| ||| ||| | |||||| ||||||| || ||||||||||| || | Sbjct 72445 ACGGTGAGGTGTCCCTCATGTCCACCATCATCAACCTGGCGCAGAACTTTGTTGGCAGCA 72504 Query 32162 ATAACCTGAACTTACTCGAG-CCATCTGGACAGTTTGGGACCCGGCT 32207 | ||| | ||| | || || ||||| || |||||||| || || || Sbjct 72505 ACAACATCAACCTGCTACAGCCCATC-GGCCAGTTTGGTACGCGCCT 72550 >seq173884 Length=22573 Score = 98.7 bits (108), Expect = 1e-15 Identities = 303/455 (67%), Gaps = 19/455 (4%) Strand=Plus/Plus Query 31961 AGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACG 32020 |||| || || || | ||| |||||| || ||||| |||||||||||| | | | Sbjct 19333 AGCGTTCGATCCCGTCCCTGGTGGACGGGCTGAAGCCGGGACAGCGCAAGGTTCTCTTCT 19392 Query 32021 CCTGCCTCAAGAAGAAC--CTGTCGAGTGACATGAAGGTGGCGCAG-CTGTCGGGCTAC- 32076 | || | ||| ||| | || | || || |||| | | ||| || |||| | | Sbjct 19393 CTTGTTTTAAGCGCAACGACAAGCGCG-GAAATTAAGGCGCCCCAGACTTGCGGGGTCCT 19451 Query 32077 GTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAG----GGC-ACCATTG 32131 ||||| || || | || ||||| ||||||||| | ||||| | | || || Sbjct 19452 GTGGCCGAACATTCTGCTTATCATCACGGCGAG----CTCTCCACTAATGTCGACGATCA 19507 Query 32132 TCAACCTTG-CTCAGAACTTTGT-CGG-TGCAAATAACCTGAACTTACTCG-AGCCATCT 32187 |||| |||| | ||||| ||||| ||| ||| | || | ||| | || | ||||| | Sbjct 19508 TCAAACTTGGCGCAGAATTTTGTTCGGCTGCCAC-AATATCAACCTGCTGGCAGCCAATT 19566 Query 32188 GGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTC 32247 || |||||||| || |||| ||||||||||| || || ||| | || || ||||| Sbjct 19567 GGTCAGTTTGGCACAAGGCTGCAGGGTGGCAAGGACGCGGCCAGCCCTCGATATATCTTT 19626 Query 32248 ACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAG 32307 ||| || |||| | |||| || | | | | ||||||| | || | || Sbjct 19627 ACCATGCTATCACCCCTGGCGCGTCTCATCGTTCCCACTTTGGACGATCCAGTCTTGGAG 19686 Query 32308 TACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATG 32367 ||| | |||||| ||||| | ||||||| || ||||| |||||||| || ||| Sbjct 19687 TACTTGTACGATGACAACCAGCGCATAGAGCCGGAGTACTACATCCCGGTGCTCCCCATG 19746 Query 32368 ATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 | | ||||| |||||||| || ||||| || || Sbjct 19747 GTTCTCGTGAATGGTGCAGAGGGAATCGGCACCGG 19781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568919669574080