Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq121772 89.7 2e-13 >seq121772 Length=16127 Score = 89.7 bits (98), Expect = 2e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 53678 TCATCGCGGTACACGAACATGACGATGTCGGCGTCTTGCTCAATGGCGCCGGACTCGCGC 53737 || |||||| |||||||| || ||||||||||| |||||||| | |||||| |||||| Sbjct 8169 TCCTCGCGGAACACGAACCACACCATGTCGGCGTCCTGCTCAATCGAGCCGGATTCGCGC 8228 Query 53738 AGGTCGCTGAGGACCGGACGCTTGTCGGGGCGAGACTCGCACCCTCGGTTTAGCTGGCAG 53797 || ||| ||| ||| |||||||| ||| |||| | | ||| | |||||| || Sbjct 8229 AGATCGGAGAGCTGCGGGCGCTTGTCCTCGCGCTGCTCGACCGCGCGGCTGAGCTGGGAG 8288 Query 53798 AGGGGAAGCACAGG 53811 || | ||||| || Sbjct 8289 AGCGCCAGCACCGG 8302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194367877457848