Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_028766.1 Length=33755 Score E Sequences producing significant alignments: (Bits) Value seq122298 84.2 5e-12 seq121302 84.2 5e-12 >seq122298 Length=39529 Score = 84.2 bits (92), Expect = 5e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 9723 ACGAGGGCGGTTATGTGAACGACCCGAAAGACCCCGGTGGCGAAACGAATTGGGGTATCA 9782 |||||||||| ||| ||||||||||||||||| ||||||| ||||||||||| |||| Sbjct 2997 ACGAGGGCGGCTATACCAACGACCCGAAAGACCCGGGTGGCGCGACGAATTGGGGCATCA 2938 Query 9783 CTATCCATACTGCCCG 9798 ||||| | |||||| Sbjct 2937 CTATCAACGATGCCCG 2922 >seq121302 Length=39529 Score = 84.2 bits (92), Expect = 5e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 9723 ACGAGGGCGGTTATGTGAACGACCCGAAAGACCCCGGTGGCGAAACGAATTGGGGTATCA 9782 |||||||||| ||| ||||||||||||||||| ||||||| ||||||||||| |||| Sbjct 36533 ACGAGGGCGGCTATACCAACGACCCGAAAGACCCGGGTGGCGCGACGAATTGGGGCATCA 36592 Query 9783 CTATCCATACTGCCCG 9798 ||||| | |||||| Sbjct 36593 CTATCAACGATGCCCG 36608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107644449405336