Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq115183 96.9 3e-15 >seq115183 Length=152922 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/159 (74%), Gaps = 4/159 (3%) Strand=Plus/Plus Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 || |||||||||| || || | | |||||||||||| || |||||||| || || Sbjct 137566 TGCGCCATCATGTGAGTCAGCAAGGCGTAGCTGGCGATATTGAAGGGCACGCCCAGGAAA 137625 Query 29786 ATGTC--CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACT 29843 || || | ||| | ||||||||||||||| || |||| ||||| ||| ||||||| Sbjct 137626 ATATCGGCACTG--CGCTGGTAGAGCTGGCAAGATAGCTTGCCGTCTGCCACATAAAACT 137683 Query 29844 GACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCA 29882 | ||| ||| ||||| || || |||||||| | |||| Sbjct 137684 GGAACAGGGCGTGGCATGGGGGCAGGGCCATCTGGCCCA 137722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405197511960424